Evidence map›Paper›PMID 34549820›Full record

ArticleThe EMBO journal2021

Molecular diversity of diencephalic astrocytes reveals adult astrogenesis regulated by Smad4.

Stefanie Ohlig, Solène Clavreul, Manja Thorwirth, Tatiana Simon-Ebert, Riccardo Bocchi, Sabine Ulbricht, Nirmal Kannayian, Moritz Rossner, Swetlana Sirko, Pawel Smialowski and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 39 citations in OpenAlex.

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    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Stefanie OhligBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.
Solène ClavreulBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.ORCID 0000-0001-5384-8425
Manja ThorwirthBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.
Tatiana Simon-EbertBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.
Riccardo BocchiBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.ORCID 0000-0002-4105-6807
Sabine UlbrichtBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.
Nirmal KannayianMolecular Neurobiology, Department of Psychiatry, LMU Munich, Munich, Germany.
Moritz RossnerMolecular Neurobiology, Department of Psychiatry, LMU Munich, Munich, Germany.ORCID 0000-0002-0667-3420
Swetlana SirkoBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.ORCID 0000-0001-5950-616X
Pawel SmialowskiBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.ORCID 0000-0002-1020-3341
Judith Fischer-SternjakBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.ORCID 0000-0003-0398-7720
Magdalena GötzBiomedical Center (BMC), Division of Physiological Genomics, Faculty of Medicine, LMU Munich, Munich, Germany.ORCID 0000-0003-1551-9203
Helmholtz Zentrum München · DELudwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Astrocytes regulate brain-wide functions and also show region-specific differences, but little is known about how general and region-specific functions are aligned at the single-cell level. To explore this, we isolated adult mouse diencephalic astrocytes by ACSA-2-mediated magnetic-activated cell sorting (MACS). Single-cell RNA-seq revealed 7 gene expression clusters of astrocytes, with 4 forming a supercluster. Within the supercluster, cells differed by gene expression related to ion homeostasis or metabolism, with the former sharing gene expression with other regions and the latter being restricted to specific regions. All clusters showed expression of proliferation-related genes, and proliferation of diencephalic astrocytes was confirmed by immunostaining. Clonal analysis demonstrated low level of astrogenesis in the adult diencephalon, but not in cerebral cortex grey matter. This led to the identification of Smad4 as a key regulator of diencephalic astrocyte in vivo proliferation and in vitro neurosphere formation. Thus, astrocytes show diverse gene expression states related to distinct functions with some subsets being more widespread while others are more regionally restricted. However, all share low-level proliferation revealing the novel concept of adult astrogenesis in the diencephalon.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsAstrocytesCell CycleCell DifferentiationCell LineageCell ProliferationCerebral CortexDiencephalonGene OntologyGene Regulatory NetworksGray MatterMetabolic Networks and PathwaysMiceMice, Inbred C57BLMice, TransgenicSmad4 ProteinSmad4 protein, mouseastrocytescerebral cortexde novo astrocyte generationproliferationSmad4

Identifiers

PMID34549820
PMCPMC8561644
OpenAlexW3200130362

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.