Evidence map›Paper›PMID 34549783›Full record

ArticleG3 (Bethesda, Md.)2021

The Gossypium anomalum genome as a resource for cotton improvement and evolutionary analysis of hybrid incompatibility.

Corrinne E Grover, Daojun Yuan, Mark A Arick, Emma R Miller, Guanjing Hu, Daniel G Peterson, Jonathan F Wendel, Joshua A Udall

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Article
  7. TheFrontiers in plant science · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Corrinne E GroverDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50010, USA.ORCID 0000-0003-3878-5459
Daojun YuanCollege of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China.
Mark A ArickInstitute for Genomics, Biocomputing & Biotechnology, Mississippi State University, MS 39762, USA.
Emma R MillerDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50010, USA.
Guanjing HuState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.ORCID 0000-0001-8552-7394
Daniel G PetersonInstitute for Genomics, Biocomputing & Biotechnology, Mississippi State University, MS 39762, USA.
Jonathan F WendelDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50010, USA.ORCID 0000-0003-2258-5081
Joshua A UdallUSDA/Agricultural Research Service, Crop Germplasm Research Unit, College Station, TX 77845, USA.ORCID 0000-0003-0978-4764
Iowa State University · USBiocom · USAgricultural Genomics Institute at Shenzhen · CNAgricultural Research Service · USHuazhong Agricultural University · CN

Funding

Training and Mentoring Core P20GM103476 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI MICHAEL R GARRETT · 2012 to 2026
$60.2M
NIGMS NIH HHS P20 GM103476
6 · The paper itself

Abstract

Cotton is an important crop that has been the beneficiary of multiple genome sequencing efforts, including diverse representatives of wild species for germplasm development. Gossypium anomalum is a wild African diploid species that harbors stress-resistance and fiber-related traits with potential application to modern breeding efforts. In addition, this species is a natural source of cytoplasmic male sterility and a resource for understanding hybrid lethality in the genus. Here, we report a high-quality de novo genome assembly for G. anomalum and characterize this genome relative to existing genome sequences in cotton. In addition, we use the synthetic allopolyploids 2(A2D1) and 2(A2D3) to discover regions in the G. anomalum genome potentially involved in hybrid lethality, a possibility enabled by introgression of regions homologous to the D3 (Gossypium davidsonii) lethality loci into the synthetic 2(A2D3) allopolyploid.

Indexed as

DiploidyGossypiumChromosome MappingGenome, Plantgenome sequenceGossypium anomalumPacBio

Identifiers

PMID34549783
PMCPMC8527517
OpenAlexW3198340736

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.