Evidence map›Paper›PMID 34549353›Full record

ArticleJournal of plant research2021

A plant-specific DYRK kinase DYRKP coordinates cell morphology in Marchantia polymorpha.

Tomoyuki Furuya, Haruka Shinkawa, Masataka Kajikawa, Ryuichi Nishihama, Takayuki Kohchi, Hideya Fukuzawa, Hirokazu Tsukaya

Open access · hybridAbstract read
In one paragraph

Article in Journal of plant research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Tomoyuki FuruyaGraduate School of Science, The University of Tokyo, Tokyo, 113- 0033, Japan.
Haruka ShinkawaGraduate School of Biostudies, Kyoto University, Kyoto, 606-8502, Japan.
Masataka KajikawaGraduate School of Biostudies, Kyoto University, Kyoto, 606-8502, Japan.
Ryuichi NishihamaGraduate School of Biostudies, Kyoto University, Kyoto, 606-8502, Japan.
Takayuki KohchiGraduate School of Biostudies, Kyoto University, Kyoto, 606-8502, Japan.
Hideya FukuzawaGraduate School of Biostudies, Kyoto University, Kyoto, 606-8502, Japan.
Hirokazu TsukayaGraduate School of Science, The University of Tokyo, Tokyo, 113- 0033, Japan. tsukaya@bs.s.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0002-4430-4538
Kyoto University · JPIshikawa Prefectural University · JPKobe University · JPThe University of Tokyo · JPTokyo University of Science · JP

Funding

ministry of education, culture, sports, science and technology 16H04805ministry of education, culture, sports, science and technology 17K07753ministry of education, culture, sports, science and technology 19H05672ministry of education, culture, sports, science and technology 19H05675ministry of education, culture, sports, science and technology 19K21189ministry of education, culture, sports, science and technology 20K15813ministry of education, culture, sports, science and technology 251113009ministry of education, culture, sports, science and technology 25113001ministry of education, culture, sports, science and technology 25113002
6 · The paper itself

Abstract

Dual-specificity tyrosine phosphorylation-regulated kinases (DYRKs) are activated via the auto-phosphorylation of conserved tyrosine residues in their activation loop during protein translation, and they then phosphorylate serine/threonine residues on substrates. The DYRK family is widely conserved in eukaryotes and is composed of six subgroups. In plant lineages, DYRK homologs are classified into four subgroups, DYRK2s, yet another kinase1s, pre-mRNA processing factor 4 kinases, and DYRKPs. Only the DYRKP subgroup is plant-specific and has been identified in a wide array of plant lineages, including land plants and green algae. It has been suggested that in Arabidopsis thaliana DYRKPs are involved in the regulation of centripetal nuclear positioning induced by dark light conditions. However, the molecular functions, such as kinase activity and the developmental and physiological roles of DYRKPs are poorly understood. Here, we focused on a sole DYRKP ortholog in the model bryophyte, Marchantia polymorpha, MpDYRKP. MpDYRKP has a highly conserved kinase domain located in the C-terminal region and shares common sequence motifs in the N-terminal region with other DYRKP members. To identify the roles of MpDYRKP in M. polymorpha, we generated loss-of-function Mpdyrkp mutants via genome editing. Mpdyrkp mutants exhibited abnormal, shrunken morphologies with less flattening in their vegetative plant bodies, thalli, and male reproductive organs, antheridial receptacles. The surfaces of the thalli in the Mpdyrkp mutants appeared uneven and disordered. Moreover, their epidermal cells were drastically altered to a narrower shape when compared to the wild type. These results suggest that MpDYRKP acts as a morphological regulator, which contributes to orderly tissue morphogenesis via the regulation of cell shape.

Indexed as

ArabidopsisMarchantiaDyrk KinasesProtein Serine-Threonine KinasesProtein-Tyrosine KinasesDyrk KinasesProtein Serine-Threonine KinasesProtein-Tyrosine KinasesCell shapeLiverwortMorphogenesisProtein kinase

Identifiers

PMID34549353
PMCPMC8514375
OpenAlexW3200751578

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.