Evidence map›Paper›PMID 34548489›Full record

ArticleNature communications2021

SON drives oncogenic RNA splicing in glioblastoma by regulating PTBP1/PTBP2 switching and RBFOX2 activity.

Jung-Hyun Kim, Kyuho Jeong, Jianfeng Li, James M Murphy, Lana Vukadin, Joshua K Stone, Alexander Richard, Johnny Tran, G Yancey Gillespie, Erik K Flemington and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
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  14. SON-dependent nuclear speckle rehabilitation alleviates proteinopathies.bioRxiv : the preprint server for biology · 2025
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. PTBP1 as a potential regulator of disease.Molecular and cellular biochemistry · 2024
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Jung-Hyun Kim *Mitchell Cancer Institute, University of South Alabama, Mobile, AL, USA.
Kyuho Jeong *Department of Biochemistry and Molecular Biology, College of Medicine, University of South Alabama, Mobile, AL, USA.
Jianfeng Li *Mitchell Cancer Institute, University of South Alabama, Mobile, AL, USA.
James M MurphyDepartment of Biochemistry and Molecular Biology, College of Medicine, University of South Alabama, Mobile, AL, USA.ORCID 0000-0002-9690-0024
Lana VukadinDepartment of Pathology, Division of Molecular and Cellular Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.
Joshua K StoneMitchell Cancer Institute, University of South Alabama, Mobile, AL, USA.
Alexander RichardMitchell Cancer Institute, University of South Alabama, Mobile, AL, USA.
Johnny TranMitchell Cancer Institute, University of South Alabama, Mobile, AL, USA.
G Yancey GillespieDepartment of Neurosurgery, University of Alabama at Birmingham, Birmingham, AL, USA.ORCID 0000-0001-6436-9542
Erik K FlemingtonDepartment of Pathology, Tulane University School of Medicine, Tulane Cancer Center, New Orleans, LA, USA.ORCID 0000-0003-0513-5281
Robert W SobolMitchell Cancer Institute, University of South Alabama, Mobile, AL, USA. rwsobol@southalabama.edu.ORCID 0000-0001-7385-3563
Ssang-Teak Steve LimDepartment of Biochemistry and Molecular Biology, College of Medicine, University of South Alabama, Mobile, AL, USA. stlim@southalabama.edu.ORCID 0000-0003-0323-8607
Eun-Young Erin AhnDepartment of Pathology, Division of Molecular and Cellular Pathology, University of Alabama at Birmingham, Birmingham, AL, USA. eyahn@uabmc.edu.ORCID 0000-0001-8795-7734
USA Mitchell Cancer Institute · USUniversity of South Alabama · USUniversity of Alabama at Birmingham · USTulane University · USUniversity of Alabama at Birmingham Hospital · US

Funding

National Dissemination of I-Corps@NCATS: Accelerating Translation through CommercializationUL1TR003096 · NCATS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GUTIERREZ, ORLANDO M, KIMBERLY, ROBERT P. · 2019 to 2023
$43.6M
Novel approaches to enhance tumor cell cytotoxicity of alkylating agentsR01CA148629 · NCI · UNIVERSITY OF SOUTH ALABAMA · PI SOBOL, ROBERT W · 2010 to 2021
$3.4M
Measuring genomic DNA damage and DNA repair capacity in longitudinal population samples - a step towards precision preventionU01ES029518 · NIEHS · UNIVERSITY OF SOUTH ALABAMA · PI SOBOL, ROBERT W · 2018 to 2022
$2.7M
SON-mediated RNA splicing in glioblastomaR01CA236911 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI AHN, ERIN EUN-YOUNG · 2020 to 2024
$1.8M
SON-mediated gene expression and leukemiaR01CA190688 · NCI · UNIVERSITY OF SOUTH ALABAMA · PI AHN, ERIN EUN-YOUNG · 2016 to 2021
$1.7M
Role of FAK in vascular inflammationR01HL136432 · NHLBI · UNIVERSITY OF SOUTH ALABAMA · PI LIM, STEVE · 2017 to 2020
$1.6M
NCATS NIH HHS UL1 TR003096NCI NIH HHS R01 CA148629NCI NIH HHS R01 CA190688NCI NIH HHS R01 CA236911NHLBI NIH HHS R01 HL136432NIEHS NIH HHS U01 ES029518
6 · The paper itself

Abstract

While dysregulation of RNA splicing has been recognized as an emerging target for cancer therapy, the functional significance of RNA splicing and individual splicing factors in brain tumors is poorly understood. Here, we identify SON as a master regulator that activates PTBP1-mediated oncogenic splicing while suppressing RBFOX2-mediated non-oncogenic neuronal splicing in glioblastoma multiforme (GBM). SON is overexpressed in GBM patients and SON knockdown causes failure in intron removal from the PTBP1 transcript, resulting in PTBP1 downregulation and inhibition of its downstream oncogenic splicing. Furthermore, SON forms a complex with hnRNP A2B1 and antagonizes RBFOX2, which leads to skipping of RBFOX2-targeted cassette exons, including the PTBP2 neuronal exon. SON knockdown inhibits proliferation and clonogenicity of GBM cells in vitro and significantly suppresses tumor growth in orthotopic xenografts in vivo. Collectively, our study reveals that SON-mediated RNA splicing is a GBM vulnerability, implicating SON as a potential therapeutic target in brain tumors.

Indexed as

RNA SplicingAnimalsBrain NeoplasmsCell CycleCell Line, TumorCell ProliferationDNA-Binding ProteinsExonsGene Expression Regulation, NeoplasticGlioblastomaHeterogeneous-Nuclear Ribonucleoprotein Group A-BHeterogeneous-Nuclear RibonucleoproteinsHeterograftsHumansIntronsMiceDNA-Binding ProteinsHeterogeneous-Nuclear Ribonucleoprotein Group A-BHeterogeneous-Nuclear RibonucleoproteinsMinor Histocompatibility AntigensNerve Tissue ProteinsPolypyrimidine Tract-Binding ProteinPTBP1 protein, humanPTBP2 protein, humanRBFOX2 protein, humanRepressor ProteinsRNA, MessengerRNA, Small InterferingRNA Splicing FactorsSON protein, human

Identifiers

PMID34548489
PMCPMC8455679
OpenAlexW3200617494

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.