Evidence map›Paper›PMID 34545459›Full record

ArticleHuman genetics2021

Biallelic variants in YRDC cause a developmental disorder with progeroid features.

Julia Schmidt, Jonas Goergens, Tatiana Pochechueva, Annika Kotter, Niko Schwenzer, Maren Sitte, Gesa Werner, Janine Altmüller, Holger Thiele, Peter Nürnberg and 14 more

Open access · hybridAbstract readCase Reports
In one paragraph

Article in Human genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. [Research progress on monogenic inherited glomerular diseases with central nervous system symptoms].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2024
    Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 8 institutions in 2 countries.

Julia SchmidtInstitute of Human Genetics, University Medical Center Göttingen, Heinrich-Düker-Weg 12, 37073, Göttingen, Germany. julia.schmidt1@med.uni-goettingen.de.ORCID http://orcid.org/0000-0002-5942-2924
Jonas GoergensMax-Planck-Institute for Biology of Ageing, Cologne, Germany.
Tatiana PochechuevaHeart Research Center Göttingen, Department of Cardiology and Pneumology, University Medical Center Göttingen, Göttingen, Germany.
Annika KotterInstitute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Mainz, Germany.
Niko SchwenzerHeart Research Center Göttingen, Department of Cardiology and Pneumology, University Medical Center Göttingen, Göttingen, Germany.
Maren SitteNGS-Integrative Genomics Core Unit (NIG), Institute of Human Genetics, University Medical Center Göttingen, Göttingen, Germany.
Gesa WernerInstitute of Human Genetics, University Medical Center Göttingen, Heinrich-Düker-Weg 12, 37073, Göttingen, Germany.
Janine AltmüllerCologne Center for Genomics (CCG), University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany.
Holger ThieleCologne Center for Genomics (CCG), University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany.
Peter NürnbergCologne Center for Genomics (CCG), University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany.
Jörg IsenseeDepartment of Anesthesiology and Intensive Care Medicine, Translational Pain Research, University Hospital of Cologne, Cologne, Germany.
Yun LiInstitute of Human Genetics, University Medical Center Göttingen, Heinrich-Düker-Weg 12, 37073, Göttingen, Germany.
Christian MüllerInstitute of Human Genetics, University Medical Center Göttingen, Heinrich-Düker-Weg 12, 37073, Göttingen, Germany.
Barbara LeubeInstitute of Human Genetics, Medical Faculty, Heinrich-Heine-University, Düsseldorf, Germany.
H Christian ReinhardtDepartment of Hematology and Stem Cell Transplantation, University Hospital Essen, University Duisburg-Essen, German Cancer Consortium (DKTK Partner Site Essen), Essen, Germany.
Tim HuchoDepartment of Anesthesiology and Intensive Care Medicine, Translational Pain Research, University Hospital of Cologne, Cologne, Germany.
Gabriela SalinasNGS-Integrative Genomics Core Unit (NIG), Institute of Human Genetics, University Medical Center Göttingen, Göttingen, Germany.
Mark HelmInstitute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Mainz, Germany.
Ron D JachimowiczMax-Planck-Institute for Biology of Ageing, Cologne, Germany.
Dagmar WieczorekInstitute of Human Genetics, Medical Faculty, Heinrich-Heine-University, Düsseldorf, Germany.
Tobias KohlHeart Research Center Göttingen, Department of Cardiology and Pneumology, University Medical Center Göttingen, Göttingen, Germany.
Stephan E LehnartHeart Research Center Göttingen, Department of Cardiology and Pneumology, University Medical Center Göttingen, Göttingen, Germany.
Gökhan YigitInstitute of Human Genetics, University Medical Center Göttingen, Heinrich-Düker-Weg 12, 37073, Göttingen, Germany.
Bernd WollnikInstitute of Human Genetics, University Medical Center Göttingen, Heinrich-Düker-Weg 12, 37073, Göttingen, Germany. bernd.wollnik@med.uni-goettingen.de.
Universitätsmedizin Göttingen · DEUniversity of Cologne · DEUniversity Hospital Cologne · DEHeinrich Heine University Düsseldorf · DEJohannes Gutenberg University Mainz · DEEssen University Hospital · DEFondation de France · FRInstitute for Small Business Economics · DE

Funding

Deutsche Forschungsgemeinschaft A09Deutsche Forschungsgemeinschaft D02Deutsche Forschungsgemeinschaft EXC 2067Deutsche Forschungsgemeinschaft FOR 2800Deutsche Forschungsgemeinschaft S02Deutsche Forschungsgemeinschaft SFB 1002Deutsche Forschungsgemeinschaft SPP 1784
6 · The paper itself

Abstract

The highly conserved YrdC domain-containing protein (YRDC) interacts with the well-described KEOPS complex, regulating specific tRNA modifications to ensure accurate protein synthesis. Previous studies have linked the KEOPS complex to a role in promoting telomere maintenance and controlling genome integrity. Here, we report on a newborn with a severe neonatal progeroid phenotype including generalized loss of subcutaneous fat, microcephaly, growth retardation, wrinkled skin, renal failure, and premature death at the age of 12 days. By trio whole-exome sequencing, we identified a novel homozygous missense mutation, c.662T > C, in YRDC affecting an evolutionary highly conserved amino acid (p.Ile221Thr). Functional characterization of patient-derived dermal fibroblasts revealed that this mutation impairs YRDC function and consequently results in reduced t

Indexed as

AllelesConsanguinityDevelopmental DisabilitiesDNA DamageGenome, HumanGenomic InstabilityGTP-Binding ProteinsHomozygoteHumansInfant, NewbornMaleMutationPedigreeProgeriaRNA-Binding ProteinsRNA, TransferGTP-Binding ProteinsRNA-Binding ProteinsRNA, TransferYRDC protein, human

Identifiers

PMID34545459
PMCPMC8553732
OpenAlexW3200700173

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.