Evidence map›Paper›PMID 34545330›Full record

ArticleBioMed research international2021

Screening and Bioinformatics Analysis of Competitive Endogenous RNA Regulatory Network --Related to Circular RNA in Breast Cancer.

Tao Wang, Yi Zhang, Yan He, Yang Liu, Peng Qi

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Tao WangDepartment of Thyroid and Breast Surgery, Hubei No. 3 People's Hospital of Jianghan University, Wuhan 430000, China.ORCID https://orcid.org/0000-0001-9415-7524
Yi ZhangDepartment of Endocrinology, Hubei No. 3 People's Hospital of Jianghan University, Wuhan 430000, China.
Yan HeDepartment of Thyroid and Breast Surgery, Hubei No. 3 People's Hospital of Jianghan University, Wuhan 430000, China.
Yang LiuDepartment of Thyroid and Breast Surgery, Hubei No. 3 People's Hospital of Jianghan University, Wuhan 430000, China.
Peng QiDepartment of Thyroid and Breast Surgery, Hubei No. 3 People's Hospital of Jianghan University, Wuhan 430000, China.ORCID https://orcid.org/0000-0002-2839-8933
Jianghan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeCircular RNA as a competitive endogenous RNA (ceRNA) plays a significant role in the pathogenesis and progression of breast cancer. In this study, a circular RNA-related ceRNA regulatory network was constructed, which provides new biomarkers and therapeutic targets for the treatment of breast cancer.

resultsIn total, 144 differentially expressed (DE) DEcircRNA, 221 DEmiRNA, and 1211 DEmRNA were obtained, and 96 circRNA-miRNA pairs and 139 miRNA-mRNA pairs were constructed by prediction. The ceRNA regulatory network (circRNA-miRNA-mRNA) was constructed, which included 42 circRNA, 36miRNA, and 78 mRNA. GO function annotation showed genes were mainly enriched in receptor activity activated by transforming growth factor beta (TGF-beta) and in the regulation of epithelial cell apoptosis. KEGG analysis showed genes were mainly enriched in the TGF-beta signaling, PI3K-Akt signaling, and Wnt signaling pathways. Four genes associated with survival and prognosis of breast cancer were obtained by survival analysis, the prognostic sub-network included 4 circRNA, 4 miRNA, and 4 mRNA. BCIP analysis and qRT-PCR verification confirmed that relative mRNA expression levels were consistent with those in the GEO database.

conclusionA circRNA-related ceRNA regulatory network was constructed for breast cancer in this study and key genes affecting pathogenesis and progression were identified. These findings may help better understand and further explore the molecular mechanisms that affect the progression and pathogenesis of breast cancer.

Indexed as

Breast NeoplasmsComputational BiologyDatabases, GeneticEarly Detection of CancerFemaleGene ExpressionGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansMass ScreeningMicroRNAsProtein Interaction MapsRNA, CircularRNA, MessengerSignal TransductionTranscriptomeMicroRNAsRNA, CircularRNA, Messenger

Identifiers

PMID34545330
PMCPMC8449716
OpenAlexW3201001430

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.