Evidence map›Paper›PMID 34544275›Full record

ArticlemBio2021

Colicin-Mediated Transport of DNA through the Iron Transporter FepA.

Ruth Cohen-Khait, Ameya Harmalkar, Phuong Pham, Melissa N Webby, Nicholas G Housden, Emma Elliston, Jonathan T S Hopper, Shabaz Mohammed, Carol V Robinson, Jeffrey J Gray and 1 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. The Therapeutic Administration ofMicroorganisms · 2026
    Article
  4. Advances in understanding Ton and Tol system motor proteins.Biochemical Society transactions · 2026
    Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Ruth Cohen-Khait *Department of Biochemistry, University of Oxfordgrid.4991.5, Oxford, United Kingdom.
Ameya Harmalkar *Chemical & Biomolecular Engineering, Johns Hopkins Universitygrid.21107.35, Baltimore, Maryland, USA.
Phuong PhamDepartment of Biochemistry, University of Oxfordgrid.4991.5, Oxford, United Kingdom.
Melissa N WebbyDepartment of Biochemistry, University of Oxfordgrid.4991.5, Oxford, United Kingdom.
Nicholas G HousdenDepartment of Biochemistry, University of Oxfordgrid.4991.5, Oxford, United Kingdom.
Emma EllistonDepartment of Biochemistry, University of Oxfordgrid.4991.5, Oxford, United Kingdom.
Jonathan T S HopperDepartment of Chemistry, University of Oxfordgrid.4991.5, Oxford, United Kingdom.
Shabaz MohammedDepartment of Biochemistry, University of Oxfordgrid.4991.5, Oxford, United Kingdom.
Carol V RobinsonDepartment of Chemistry, University of Oxfordgrid.4991.5, Oxford, United Kingdom.
Jeffrey J GrayChemical & Biomolecular Engineering, Johns Hopkins Universitygrid.21107.35, Baltimore, Maryland, USA.
Colin KleanthousDepartment of Biochemistry, University of Oxfordgrid.4991.5, Oxford, United Kingdom.ORCID 0000-0002-3273-0302
University of Oxford · GBJohns Hopkins University · US

Funding

Prediction of the Structure of Therapeutic Antibodies with their AntigensR01GM078221 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI GRAY, JEFFREY J · 2006 to 2020
$4.0M
Biotechnology and Biological Sciences Research Council BB/P009948/1NIGMS NIH HHS R01 GM078221
6 · The paper itself

Abstract

Colicins are protein antibiotics deployed by Escherichia coli to eliminate competing strains. Colicins frequently exploit outer membrane (OM) nutrient transporters to penetrate the selectively permeable bacterial cell envelope. Here, by applying live-cell fluorescence imaging, we were able to monitor the entry of the pore-forming toxin colicin B (ColB) into E. coli and localize it within the periplasm. We further demonstrate that single-stranded DNA coupled to ColB can also be transported to the periplasm, emphasizing that the import routes of colicins can be exploited to carry large cargo molecules into bacteria. Moreover, we characterize the molecular mechanism of ColB association with its OM receptor FepA by applying a combination of photoactivated cross-linking, mass spectrometry, and structural modeling. We demonstrate that complex formation is coincident with large-scale conformational changes in the colicin. Thereafter, active transport of ColB through FepA involves the colicin taking the place of the N-terminal half of the plug domain that normally occludes this iron transporter.

Indexed as

Anti-Bacterial AgentsBacterial Outer Membrane ProteinsBacteriocinsBiological TransportCarrier ProteinsCell MembraneColicinsDNAEscherichia coliEscherichia coli ProteinsIronMembrane Transport ProteinsModels, MolecularPeriplasmPeriplasmic ProteinsProtein ConformationAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBacteriocinsCarrier ProteinsColicinsDNAenterobactin receptorEscherichia coli ProteinsIronMembrane Transport ProteinsPeriplasmic ProteinsReceptors, Cell Surfaceantibiotic resistancebacteriocinsconformational changesDNA deliverymembrane transportRosetta flexible backbone

Identifiers

PMID34544275
PMCPMC8546555
OpenAlexW3201284557

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.