Evidence map›Paper›PMID 34543122›Full record

ArticleInfection and immunity2021

Functional Properties of Oligomeric and Monomeric Forms of Helicobacter pylori VacA Toxin.

Georgia C Caso, Mark S McClain, Amanda L Erwin, Mandy D Truelock, Anne M Campbell, Catherine S Leasure, Marcus Nagel, Kevin L Schey, D Borden Lacy, Melanie D Ohi and 1 more

Abstract read
In one paragraph

Article in Infection and immunity, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Characterization ofFrontiers in microbiology · 2026
    Article
  2. Taurine modulates host cell responses toInfection and immunity · 2024
    Article
  3. Review
  4. Article
  5. Review
  6. Clinical Pathogenesis, Molecular Mechanisms of Gastric Cancer Development.Current topics in microbiology and immunology · 2023
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Georgia C CasoDepartment of Medicine, Vanderbilt University School of Medicinegrid.471397.f, Nashville, Tennessee, USA.
Mark S McClainDepartment of Medicine, Vanderbilt University School of Medicinegrid.471397.f, Nashville, Tennessee, USA.ORCID 0000-0002-9857-4883
Amanda L ErwinLife Sciences Institute and Department of Cell and Developmental Biology, University of Michigan, Ann Arbor, Michigan, USA.
Mandy D TruelockDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicinegrid.471397.f, Nashville, Tennessee, USA.
Anne M CampbellDepartment of Medicine, Vanderbilt University School of Medicinegrid.471397.f, Nashville, Tennessee, USA.
Catherine S LeasureDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicinegrid.471397.f, Nashville, Tennessee, USA.
Marcus NagelMass Spectrometry Research Center, Department of Biochemistry, Vanderbilt University School of Medicinegrid.471397.f, Nashville, Tennessee, USA.
Kevin L ScheyMass Spectrometry Research Center, Department of Biochemistry, Vanderbilt University School of Medicinegrid.471397.f, Nashville, Tennessee, USA.
D Borden LacyDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicinegrid.471397.f, Nashville, Tennessee, USA.ORCID 0000-0003-2273-8121
Melanie D OhiLife Sciences Institute and Department of Cell and Developmental Biology, University of Michigan, Ann Arbor, Michigan, USA.
Timothy L CoverDepartment of Medicine, Vanderbilt University School of Medicinegrid.471397.f, Nashville, Tennessee, USA.ORCID 0000-0001-8503-002X

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI STACIE B DUSETZINA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Role of Iron and B-Catenin Activation in Gastric CarcinogenesisP01CA116087 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2009 to 2026
$27.5M
Structure-function analysis of H. pylori VacAR01AI039657 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI TIMOTHY L COVER · 1996 to 2026
$8.3M
Type IV Protein Secretion in Helicobacter pyloriR01AI118932 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COVER, TIMOTHY L, OHI, MELANIE DIANE · 2016 to 2025
$6.7M
Chemical Biology of Infectious Diseases (CBID) Training ProgramT32AI112541 · NIAID · VANDERBILT UNIVERSITY · PI Eric P Skaar · 2015 to 2026
$4.0M
Immunological Mechanisms of Disease Training ProgramT32AI138932 · NIAID · VANDERBILT UNIVERSITY · PI MAJOR, AMY S, RATHMELL, JEFFREY C. · 2019 to 2023
$1.4M
"Pathogenesis of Helicobacter pylori Infection"I01BX004447 · VA · VETERANS HEALTH ADMINISTRATION · PI TIMOTHY L COVER · 2019 to 2026
–
BLRD VA I01 BX004447NCI NIH HHS P01 CA116087NCI NIH HHS P30 CA068485NIAID NIH HHS R01 AI039657NIAID NIH HHS R01 AI118932NIAID NIH HHS T32 AI112541NIAID NIH HHS T32 AI138932NIDDK NIH HHS P30 DK058404
6 · The paper itself

Abstract

Helicobacter pylori VacA is a secreted toxin that assembles into water-soluble oligomeric structures and forms anion-selective membrane channels. Acidification of purified VacA enhances its activity in cell culture assays. Sites of protomer-protomer contact within VacA oligomers have been identified by cryoelectron microscopy, and in the current study, we validated several of these interactions by chemical cross-linking and mass spectrometry. We then mutated amino acids at these contact sites and analyzed the effects of the alterations on VacA oligomerization and activity. VacA proteins with amino acid charge reversals at interprotomer contact sites retained the capacity to assemble into water-soluble oligomers and retained cell-vacuolating activity. Introduction of paired cysteine substitutions at these sites resulted in formation of disulfide bonds between adjacent protomers. Negative-stain electron microscopy and single-particle two-dimensional class analysis revealed that wild-type VacA oligomers disassemble when exposed to acidic pH, whereas the mutant proteins with paired cysteine substitutions retain an oligomeric state at acidic pH. Acid-activated wild-type VacA caused vacuolation of cultured cells, whereas acid-activated mutant proteins with paired cysteine substitutions lacked cell-vacuolating activity. Treatment of these mutant proteins with both low pH and a reducing agent resulted in VacA binding to cells, VacA internalization, and cell vacuolation. Internalization of a nonoligomerizing mutant form of VacA by host cells was detected without a requirement for acid activation. Collectively, these results enhance our understanding of the molecular interactions required for VacA oligomerization and support a model in which toxin activity depends on interactions of monomeric VacA with host cells.

Indexed as

Protein ConformationProtein MultimerizationBacterial ProteinsBacterial ToxinsProtein BindingProtein Interaction Domains and MotifsStructure-Activity RelationshipBacterial ProteinsBacterial ToxinsVacA protein, Helicobacter pyloribacterial protein toxinbacterial toxinsgastric cancermembrane channel proteinsmembrane channelsoligomerizationpore-forming proteinspore-forming toxins

Identifiers

PMID34543122
PMCPMC8594603

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.