Evidence map›Paper›PMID 34542728›Full record

ArticleMikrochimica acta2021

LAMP-CRISPR-Cas12-based diagnostic platform for detection of Mycobacterium tuberculosis complex using real-time fluorescence or lateral flow test.

Yi Wang, Jieqiong Li, Shijun Li, Xiong Zhu, Xiaoxia Wang, Junfei Huang, Xinggui Yang, Jun Tai

Abstract read
PubMed Publisher
In one paragraph

Article in Mikrochimica acta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Rapid and sensitive detection ofMicrobiology spectrum · 2025
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. CRISPR-epigenetic crosstalk: From bidirectional regulation to therapeutic potential.Computational and structural biotechnology journal · 2025
    Review
  18. Article
  19. Review
  20. Rapid detection ofJournal of clinical microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yi Wang *Experimental Research Center, Capital Institute of Pediatrics, Beijing, 100020, People's Republic of China. wildwolf0101@163.com.ORCID http://orcid.org/0000-0002-2031-087X
Jieqiong Li *Department of Respiratory Disease, Beijing Pediatric Research Institute, Beijing Children's Hospital, National Center for Children's Health, Capital Medical University, Beijing, 100045, People's Republic of China.
Shijun Li *Laboratory of Infectious Disease of Experimental Center, Guizhou Provincial Center for Disease Control and Prevention, Guiyang, 550050, China.
Xiong Zhu *Central & Clinical Laboratory of Sanya People's Hospital, Sanya, Hainan, 572000, People's Republic of China.
Xiaoxia WangCentral & Clinical Laboratory of Sanya People's Hospital, Sanya, Hainan, 572000, People's Republic of China.
Junfei HuangLaboratory of Infectious Disease of Experimental Center, Guizhou Provincial Center for Disease Control and Prevention, Guiyang, 550050, China.
Xinggui YangPublic Health School, Guizhou Medical University, Guiyang, 550025, Guizhou, People's Republic of China.
Jun TaiDepartment of Otolaryngology, Head and Neck Surgery, Children's Hospital Capital Institute of Pediatrics, Beijing, 100020, People's Republic of China. trenttj@163.com.

Funding

Cultivation Fund Project of the National Natural Science Foundation in Beijing Children's Hospital GPMS201904Qian Ke He Support Plan [2019]2822;[2019]1186
6 · The paper itself

Abstract

A CRISPR-based nucleic acid detection platform, termed LACD (loop-mediated isothermal amplification coupled with CRISPR-Cas12a-mediated diagnostic) has been developed. In the LACD system, the core primer used in conventional LAMP (forward inner primer or backward inner primer) was engineered to contain a PAM (protospacer adjacent motif) site (TTTT) at the linker region. As a result, the LAMP amplicons contained a specific PAM site for CRISPR-Cas12a recognition. At the CRISPR-mediated detection stage, the resulting LAMP products can activate the corresponding CRISPR-Cas12a effector upon the formation of the CRISPR-Cas12a/gRNA/target DNA complex. The single-strand DNA (ssDNA) reporter molecules are then rapidly cleaved due to the CRISPR-Cas12a's trans-enzyme activity. The ssDNA degradation can then be visualized on a lateral flow biosensor or measured  by a real-time fluorescence instrument. Our LACD assay allows any target sequence to be detected (even targets which do not contain any PAM sites) as long as they met the design requirement for LAMP. The feasibility of the LACD methodology for nucleic acid detection was validated on the Mycobacterium tuberculosis complex (MTC). This proof-of-concept assay can be reconfigured to detect a variety of target sequences by redesigning the engineered LAMP primers.

Indexed as

CRISPR-Cas SystemsBacterial ProteinsBiosensing TechniquesCRISPR-Associated ProteinsDNA, BacterialEndodeoxyribonucleasesFluorescenceHumansMolecular Diagnostic TechniquesMycobacteriumNucleic Acid Amplification TechniquesSputumBacterial ProteinsCas12a proteinCRISPR-Associated ProteinsDNA, BacterialEndodeoxyribonucleasesCas12aFluorescence detection; Lateral flow test; CRISPRLACDLAMPNucleic acid detection

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.