Evidence map›Paper›PMID 34542726›Full record

ArticleArchives of virology2021

Novel viruses belonging to the family Circoviridae identified in wild American wigeon samples.

Anthony Khalifeh, Joy M Custer, Simona Kraberger, Arvind Varsani

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Anthony KhalifehBiodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine, School of Life Sciences, Arizona State University, Tempe, AZ, USA.
Joy M CusterBiodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine, School of Life Sciences, Arizona State University, Tempe, AZ, USA.
Simona KrabergerBiodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine, School of Life Sciences, Arizona State University, Tempe, AZ, USA.
Arvind VarsaniBiodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine, School of Life Sciences, Arizona State University, Tempe, AZ, USA. arvind.varsani@asu.edu.ORCID http://orcid.org/0000-0003-4111-2415
Arizona State University · USUniversity of Cape Town · ZA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Members of the family Circoviridae are known to infect several avian species, with the ability to cause severe disease outcomes in some species. Using a high-throughput sequencing-informed approach, we identified two novel lineages of circoviruses, referred to as wigfec circovirus 1 and 2, in faecal matter of American wigeons (Mareca americana) collected in Arizona, USA. Wigfec circovirus 1 was identified in eight samples and is most closely related to the other waterfowl circoviruses, sharing ~64% genome-wide sequence identity with duck circoviruses. On the other hand, wigfec circovirus 2 was identified in two samples and is most closely related to two circoviruses identified in bat samples, sharing ~71% genome-wide pairwise identity. Both novel circoviruses were recovered from samples collected at the same location two months apart. Furthermore, in one sample, both of these viruses were identified, indicating these viruses are likely common amongst these birds and/or their environment.

Indexed as

CircoviridaeCircoviridae InfectionsCircovirusAnimalsDucksGenome, ViralPhylogeny

Identifiers

PMID34542726
OpenAlexW3200513026

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.