Evidence map›Paper›PMID 34541092›Full record

ArticleBio-protocol2017

Single Genome Sequencing of Expressed and Proviral HIV-1 Envelope Glycoprotein 120 (

David J Nolan, Susanna L Lamers, Rebecca Rose, James J Dollar, Marco Salemi, Michael S McGrath

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Bio-protocol, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

David J NolanBioinfoexperts, LLC, Thibodaux, Louisiana, USA.
Susanna L LamersBioinfoexperts, LLC, Thibodaux, Louisiana, USA.
Rebecca RoseBioinfoexperts, LLC, Thibodaux, Louisiana, USA.
James J DollarBioinfoexperts, LLC, Thibodaux, Louisiana, USA.
Marco SalemiDepartment of Pathology, Immunology and Laboratory Medicine, Emerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.
Michael S McGrathDepartments of Laboratory Medicine, Pathology, and Medicine, University of California at San Francisco, San Francisco, California, USA.
University of Florida · USUniversity of California, San Francisco · US

Funding

AIDS and Cancer Specimen Resource (ACSR)UM1CA181255 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jeffrey Michael Bethony, Anna Coghill · 2013 to 2026
$56.7M
Viral evolution in peropheral macrophages and brain during progression to AIDSR01NS063897 · NINDS · UNIVERSITY OF FLORIDA · PI SALEMI, MARCO · 2009 to 2021
$7.0M
Molecular Features of and Approach to the HIV CNS Reservoir Post cARTR01MH100984 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MCGRATH, MICHAEL SHANNON · 2013 to 2017
$1.9M
NCI NIH HHS UM1 CA181255NIMH NIH HHS R01 MH100984NINDS NIH HHS R01 NS063897
6 · The paper itself

Abstract

The current study provides detailed protocols utilized to amplify the complete HIV-1

Indexed as

Gene amplificationHIV-1Nested PCRSGSSingle genome sequencing

Identifiers

PMID34541092
PMCPMC8410429
OpenAlexW2715464327

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.