Evidence map›Paper›PMID 34539702›Full record

ReviewFrontiers in plant science2021

A Life Cycle for Modeling Biology at Different Scales.

Kate Harline, Jesús Martínez-Gómez, Chelsea D Specht, Adrienne H K Roeder

Abstract readReview
In one paragraph

Review in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Quantitative plant biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kate HarlineSection of Plant Biology, School of Integrative Plant Science, Cornell University, Ithaca, NY, United States.
Jesús Martínez-GómezSection of Plant Biology, School of Integrative Plant Science, Cornell University, Ithaca, NY, United States.
Chelsea D SpechtSection of Plant Biology, School of Integrative Plant Science, Cornell University, Ithaca, NY, United States.
Adrienne H K RoederSection of Plant Biology, School of Integrative Plant Science, Cornell University, Ithaca, NY, United States.

Funding

Mechanisms of robustness in organogenesis (Equipment Supplement 2023)R01GM134037 · NIGMS · CORNELL UNIVERSITY · PI ROEDER, ADRIENNE H · 2020 to 2023
$1.5M
NIGMS NIH HHS R01 GM134037
6 · The paper itself

Abstract

Modeling has become a popular tool for inquiry and discovery across biological disciplines. Models allow biologists to probe complex questions and to guide experimentation. Modeling literacy among biologists, however, has not always kept pace with the rise in popularity of these techniques and the relevant advances in modeling theory. The result is a lack of understanding that inhibits communication and ultimately, progress in data gathering and analysis. In an effort to help bridge this gap, we present a blueprint that will empower biologists to interrogate and apply models in their field. We demonstrate the applicability of this blueprint in two case studies from distinct subdisciplines of biology; developmental-biomechanics and evolutionary biology. The models used in these fields vary from summarizing dynamical mechanisms to making statistical inferences, demonstrating the breadth of the utility of models to explore biological phenomena.

Indexed as

biomechanicsdevelopmental modelingevo-devomorphodynamicsplant morphogenesis

Identifiers

PMID34539702
PMCPMC8446664

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.