Evidence map›Paper›PMID 34536142›Full record

ArticlePlanta2021

Genome-wide analysis of the bZIP gene lineage in apple and functional analysis of MhABF in Malus halliana.

Shuangcheng Wang, Rui Zhang, Zhongxing Zhang, Ting Zhao, De Zhang, Svetla Sofkova, Yuxia Wu, Yanxiu Wang

Abstract read
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Article in Planta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Functional Identification ofPlants (Basel, Switzerland) · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The bZIP transcription factors inFrontiers in plant science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shuangcheng WangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Rui ZhangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Zhongxing ZhangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Ting ZhaoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
De ZhangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Svetla SofkovaInstitute of Agriculture and Environment, Massey University, Palmerston North, 4442, New Zealand.
Yuxia WuCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China. wuyx@gsau.edu.cn.
Yanxiu WangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China. wangxy@gsau.edu.cn.ORCID http://orcid.org/0000-0002-5449-4144

Funding

Gansu University of Chinese Medicine GSAU-XKJS-2018-221National Natural Science Foundation of China 31960581
6 · The paper itself

Abstract

MAIN

conclusion51 MdbZIP genes were identified from the apple genome by bioinformatics methods. MhABF-OE improved tolerance to saline-alkali stress in Arabidopsis, indicating it is involved in positive regulation of saline-alkali stress response. Saline-alkali stress is a major abiotic stress limiting plant growth all over the world. Members of the bZIP family play an important role in regulating gene expression in response to many kinds of biotic and abiotic stress, including salt stress. According to the transcriptome data, 51 MdbZIP genes responding to saline-alkali stress were identified in apple genome, and their gene structures, conserved protein motifs, phylogenetic analysis, chromosome localization, and promoter cis-acting elements were analyzed. Based on transcriptome data analysis, a MdbZIP family gene (MD15G1081800), which was highly expressed under stress, was selected to isolate and named as MhABF. Expression profile analysis by quantitative real-time PCR confirmed that the expression of MhABF in the leaves of Malus halliana was 10.6-fold higher than that of the control (0 days) after 2 days of stress. Then an MhABF gene was isolated from apple rootstock M. halliana. CaMV35S promoter drived MhABF gene expression vector was constructed to infect Arabidopsis with Agrobacterium-mediated infection. And overexpression MhABF gene plants were obtained. Compared with wild type, transgenic plants grew better under saline-alkali stress and the MhABF-OE lines showed higher chlorophyll content, POD, SOD and CAT activity, which indicated that they had strong resistance to stress. These results indicate that MhABF plays an important role in plant resistance to saline-alkali stress, which lays a foundation for further study on the functions in apple.

Indexed as

ArabidopsisMalusGene Expression Regulation, PlantGenome, PlantPhylogenyPlant ProteinsStress, PhysiologicalPlant ProteinsApplebZIP gene familyFunction identificationMhABFSaline–alkali stress

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.