Evidence map›Paper›PMID 34534105›Full record

ArticleAging2021

Nucleotide variants in hepatitis B virus preS region predict the recurrence of hepatocellular carcinoma.

Xi Chen, Minfeng Zhang, Nan Li, Rui Pu, Ting Wu, Yibo Ding, Peng Cai, Hongwei Zhang, Jun Zhao, Jianhua Yin and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Xi ChenDepartment of Epidemiology, Faculty of Navy Medicine, Second Military Medical University, Shanghai, China.
Minfeng ZhangDepartment of Surgery, Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, Shanghai, China.
Nan LiDepartment of Surgery, Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, Shanghai, China.
Rui PuDepartment of Epidemiology, Faculty of Navy Medicine, Second Military Medical University, Shanghai, China.
Ting WuDepartment of Epidemiology, Faculty of Navy Medicine, Second Military Medical University, Shanghai, China.
Yibo DingDepartment of Epidemiology, Faculty of Navy Medicine, Second Military Medical University, Shanghai, China.
Peng CaiDepartment of Epidemiology, Faculty of Navy Medicine, Second Military Medical University, Shanghai, China.
Hongwei ZhangDepartment of Epidemiology, Faculty of Navy Medicine, Second Military Medical University, Shanghai, China.
Jun ZhaoDepartment of Surgery, Eastern Hepatobiliary Surgery Hospital, Second Military Medical University, Shanghai, China.
Jianhua YinDepartment of Epidemiology, Faculty of Navy Medicine, Second Military Medical University, Shanghai, China.
Guangwen CaoDepartment of Epidemiology, Faculty of Navy Medicine, Second Military Medical University, Shanghai, China.
Second Military Medical University · CNEastern Hepatobiliary Surgery Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatitis B virus (HBV) variants in the preS region have been associated with hepatocellular carcinoma (HCC). However, the effect of the preS variants on HCC prognosis remains largely unknown. We aimed to identify the preS variants that reliably predict postoperative prognosis in HCC.

methodsRNA-seq data of 203 HCC patients retrieved from public database were screened for the preS variants related to HCC prognosis. The variants in the sera and tumors were then validated in our prospective cohort enrolling 103 HBV-associated HCC patients.

resultsBy analyzing prognosis-related gene sets in the RNA-seq data, 12 HBV preS variants were associated with HCC recurrence. Of those, G40C and C147T in the sera predicted an unfavorable recurrence-free survival in our cohort (hazard ratio [HR]=2.18, 95% confidence interval [CI]=1.37-3.47,

conclusionsG40C and C147T are serological biomarkers for HCC prognosis and the prognostic model consisting of serological α-fetoprotein and G40C achieved the best performance in predicting postoperative prognosis.

Indexed as

Neoplasm Recurrence, LocalPrognosisalpha-FetoproteinsAntiviral AgentsBiomarkersCarcinoma, HepatocellularCell ProliferationFemaleHepatitis B virusHumansLiver NeoplasmsMaleMiddle AgedNucleotidesProspective StudiesAFP protein, humanalpha-FetoproteinsAntiviral AgentsBiomarkersNucleotideshepatitis B virushepatocellular carcinomaprediction modelprognosisviral variant

Identifiers

PMID34534105
PMCPMC8507287
OpenAlexW3201019326

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.