Evidence map›Paper›PMID 34533669›Full record

ArticleClinical & experimental metastasis2021

Distinguishing pure histopathological growth patterns of colorectal liver metastases on CT using deep learning and radiomics: a pilot study.

Martijn P A Starmans, Florian E Buisman, Michel Renckens, François E J A Willemssen, Sebastian R van der Voort, Bas Groot Koerkamp, Dirk J Grünhagen, Wiro J Niessen, Peter B Vermeulen, Cornelis Verhoef and 2 more

Abstract read
In one paragraph

Article in Clinical & experimental metastasis, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

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  15. Radiomics in colorectal cancer patients.World journal of gastroenterology · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Martijn P A Starmans *Department of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands. m.starmans@erasmusmc.nl.ORCID 0000-0001-5086-7153
Florian E Buisman *Department of Surgery, Erasmus MC Cancer Institute, Rotterdam, The Netherlands.
Michel RenckensDepartment of Surgery, Erasmus MC Cancer Institute, Rotterdam, The Netherlands.
François E J A WillemssenDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands.
Sebastian R van der VoortDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands.
Bas Groot KoerkampDepartment of Surgery, Erasmus MC Cancer Institute, Rotterdam, The Netherlands.
Dirk J GrünhagenDepartment of Surgery, Erasmus MC Cancer Institute, Rotterdam, The Netherlands.
Wiro J NiessenDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands.
Peter B VermeulenTranslational Cancer Research Unit, Department of Oncological Research, Oncology Center, GZA Hospitals Campus Sint-Augustinus and University of Antwerp, Antwerp, Belgium.
Cornelis VerhoefDepartment of Surgery, Erasmus MC Cancer Institute, Rotterdam, The Netherlands.
Jacob J VisserDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands.
Stefan KleinDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands.

Funding

KWF Kankerbestrijding EMCR 2015-7859Stichting voor de Technische Wetenschappen 14929-14930
6 · The paper itself

Abstract

Histopathological growth patterns (HGPs) are independent prognosticators for colorectal liver metastases (CRLM). Currently, HGPs are determined postoperatively. In this study, we evaluated radiomics for preoperative prediction of HGPs on computed tomography (CT), and its robustness to segmentation and acquisition variations. Patients with pure HGPs [i.e. 100% desmoplastic (dHGP) or 100% replacement (rHGP)] and a CT-scan who were surgically treated at the Erasmus MC between 2003-2015 were included retrospectively. Each lesion was segmented by three clinicians and a convolutional neural network (CNN). A prediction model was created using 564 radiomics features and a combination of machine learning approaches by training on the clinician's and testing on the unseen CNN segmentations. The intra-class correlation coefficient (ICC) was used to select features robust to segmentation variations; ComBat was used to harmonize for acquisition variations. Evaluation was performed through a 100 × random-split cross-validation. The study included 93 CRLM in 76 patients (48% dHGP; 52% rHGP). Despite substantial differences between the segmentations of the three clinicians and the CNN, the radiomics model had a mean area under the curve of 0.69. ICC-based feature selection or ComBat yielded no improvement. Concluding, the combination of a CNN for segmentation and radiomics for classification has potential for automatically distinguishing dHGPs from rHGP, and is robust to segmentation and acquisition variations. Pending further optimization, including extension to mixed HGPs, our model may serve as a preoperative addition to postoperative HGP assessment, enabling further exploitation of HGPs as a biomarker.

Indexed as

Deep LearningAgedColorectal NeoplasmsFemaleHumansLiver NeoplasmsMaleMiddle AgedPilot ProjectsTomography, X-Ray ComputedBiomarkersComputedDeep learningLiver neoplasmsMachine learningTomographyX-ray

Identifiers

PMID34533669
PMCPMC8510954

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.