Evidence map›Paper›PMID 34531835›Full record

ArticleFrontiers in microbiology2021

Comparative Analysis of Machine Learning Algorithms on Surface Enhanced Raman Spectra of Clinical

Jia-Wei Tang, Qing-Hua Liu, Xiao-Cong Yin, Ya-Cheng Pan, Peng-Bo Wen, Xin Liu, Xing-Xing Kang, Bing Gu, Zuo-Bin Zhu, Liang Wang

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Explainable AI-SERS approach for highly accurate discrimination ofCurrent research in microbial sciences · 2026
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  16. Identification ofInfection and drug resistance · 2024
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  19. Rapid discrimination ofFrontiers in microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jia-Wei TangDepartment of Bioinformatics, School of Medical Informatics and Engineering, Xuzhou Medical University, Xuzhou, China.
Qing-Hua LiuState Key Laboratory of Quality Research in Chinese Medicines, Macau University of Science and Technology, Taipa, China.
Xiao-Cong YinDepartment of Laboratory Medicine, School of Medical Technology, Xuzhou Medical University, Xuzhou, China.
Ya-Cheng PanSchool of Life Science, Xuzhou Medical University, Xuzhou, China.
Peng-Bo WenDepartment of Bioinformatics, School of Medical Informatics and Engineering, Xuzhou Medical University, Xuzhou, China.
Xin LiuDepartment of Bioinformatics, School of Medical Informatics and Engineering, Xuzhou Medical University, Xuzhou, China.
Xing-Xing KangDepartment of Bioinformatics, School of Medical Informatics and Engineering, Xuzhou Medical University, Xuzhou, China.
Bing GuDepartment of Laboratory Medicine, School of Medical Technology, Xuzhou Medical University, Xuzhou, China.
Zuo-Bin ZhuSchool of Life Science, Xuzhou Medical University, Xuzhou, China.
Liang WangDepartment of Bioinformatics, School of Medical Informatics and Engineering, Xuzhou Medical University, Xuzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Raman spectroscopy (RS) is a widely used analytical technique based on the detection of molecular vibrations in a defined system, which generates Raman spectra that contain unique and highly resolved fingerprints of the system. However, the low intensity of normal Raman scattering effect greatly hinders its application. Recently, the newly emerged surface enhanced Raman spectroscopy (SERS) technique overcomes the problem by mixing metal nanoparticles such as gold and silver with samples, which greatly enhances signal intensity of Raman effects by orders of magnitudes when compared with regular RS. In clinical and research laboratories, SERS provides a great potential for fast, sensitive, label-free, and non-destructive microbial detection and identification with the assistance of appropriate machine learning (ML) algorithms. However, choosing an appropriate algorithm for a specific group of bacterial species remains challenging, because with the large volumes of data generated during SERS analysis not all algorithms could achieve a relatively high accuracy. In this study, we compared three unsupervised machine learning methods and 10 supervised machine learning methods, respectively, on 2,752 SERS spectra from 117

Indexed as

convolutional neural networklong short-term memory neural networkmachine learningRaman spectroscopysurface enhanced Raman spectroscopy

Identifiers

PMID34531835
PMCPMC8439569

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.