Evidence map›Paper›PMID 34529940›Full record

ArticleDevelopmental cell2021

Discrete cis-acting element regulates developmentally timed gene-lamina relocation and neural progenitor competence in vivo.

Tanguy Lucas, Terry L Hafer, Harrison G Zhang, Natalia Molotkova, Minoree Kohwi

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  5. Article
  6. Temporal regulation of neural diversity in Drosophila and vertebrates.Seminars in cell & developmental biology · 2023
    Review
  7. Review
  8. Article
  9. Nuclear Architecture in the Nervous System.Results and problems in cell differentiation · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Tanguy LucasDepartment of Neuroscience, Mortimer B. Zuckerman Institute Mind Brain Behavior, Columbia University, New York, NY 10027, USA.
Terry L HaferDepartment of Neuroscience, Mortimer B. Zuckerman Institute Mind Brain Behavior, Columbia University, New York, NY 10027, USA.
Harrison G ZhangDepartment of Neuroscience, Mortimer B. Zuckerman Institute Mind Brain Behavior, Columbia University, New York, NY 10027, USA.
Natalia MolotkovaDepartment of Neuroscience, Mortimer B. Zuckerman Institute Mind Brain Behavior, Columbia University, New York, NY 10027, USA.
Minoree KohwiDepartment of Neuroscience, Mortimer B. Zuckerman Institute Mind Brain Behavior, Columbia University, New York, NY 10027, USA; Kavli Institute for Brain Science, Columbia University, New York, NY 10027, USA. Electronic address: mk3632@columbia.edu.
Columbia University · US

Funding

Regulation of neural progenitor competenceR01HD092381 · NICHD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KOHWI, MINOREE · 2017 to 2021
$1.7M
Mechanisms underlying loss of neural stem cell competence.R00HD072035 · NICHD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KOHWI, MINOREE · 2014 to 2016
$735k
NICHD NIH HHS R00 HD072035NICHD NIH HHS R01 HD092381
6 · The paper itself

Abstract

The nuclear lamina is typically associated with transcriptional silencing, and peripheral relocation of genes highly correlates with repression. However, the DNA sequences and proteins regulating gene-lamina interactions are largely unknown. Exploiting the developmentally timed hunchback gene movement to the lamina in Drosophila neuroblasts, we identified a 250 bp intronic element (IE) both necessary and sufficient for relocation. The IE can target a reporter transgene to the lamina and silence it. Endogenously, however, hunchback is already repressed prior to relocation. Instead, IE-mediated relocation confers a heritably silenced gene state refractory to activation in descendent neurons, which terminates neuroblast competence to specify early-born identity. Surprisingly, we found that the Polycomb group chromatin factors bind the IE and are required for lamina relocation, revealing a nuclear architectural role distinct from their well-known function in transcriptional repression. Together, our results uncover in vivo mechanisms underlying neuroblast competence and lamina association in heritable gene silencing.

Indexed as

AnimalsAnimals, Genetically ModifiedCell DifferentiationCentral Nervous SystemDNA-Binding ProteinsDrosophila ProteinsGene Expression Regulation, DevelopmentalNeural Stem CellsNeuronsTranscription FactorsDNA-Binding ProteinsDrosophila ProteinsTranscription Factorscell fateDrosophilaneural progenitorneuroblastnuclear architecturenuclear laminaPolycombstem cell competencetemporal identity

Identifiers

PMID34529940
PMCPMC8629127
OpenAlexW3200542152

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.