Evidence map›Paper›PMID 34528111›Full record

ArticleArchives of microbiology2021

Anaerobic 3-methylhopanoid production by an acidophilic photosynthetic purple bacterium.

Marisa H Mayer, Mary N Parenteau, Megan L Kempher, Michael T Madigan, Linda L Jahnke, Paula V Welander

Open access · hybridAbstract read
In one paragraph

Article in Archives of microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Primary production by the purple nonsulfur bacteriumApplied and environmental microbiology · 2025
    Article
  2. Article
  3. The evolutionary history and modern diversity of triterpenoid cyclases.bioRxiv : the preprint server for biology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Marisa H MayerDepartment of Earth System Science, Stanford University, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0002-0493-0163
Mary N ParenteauExobiology Branch, NASA Ames Research Center, Moffett Field, CA, 94035, USA. mary.n.parenteau@nasa.gov.
Megan L KempherDepartment of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA.
Michael T MadiganDepartment of Microbiology, Southern Illinois University, Carbondale, IL, 62901, USA.
Linda L JahnkeExobiology Branch, NASA Ames Research Center, Moffett Field, CA, 94035, USA.
Paula V WelanderDepartment of Earth System Science, Stanford University, Stanford, CA, 94305, USA.
Ames Research Center · USStanford University · USSouthern Illinois University Carbondale · USUniversity of Oklahoma · US

Funding

NASA NNX15AM17G
6 · The paper itself

Abstract

Bacterial lipids are well-preserved in ancient rocks and certain ones have been used as indicators of specific bacterial metabolisms or environmental conditions existing at the time of rock deposition. Here we show that an anaerobic bacterium produces 3-methylhopanoids, pentacyclic lipids previously detected only in aerobic bacteria and widely used as biomarkers for methane-oxidizing bacteria. Both Rhodopila globiformis, a phototrophic purple nonsulfur bacterium isolated from an acidic warm spring in Yellowstone, and a newly isolated Rhodopila species from a geochemically similar spring in Lassen Volcanic National Park (USA), synthesized 3-methylhopanoids and a suite of related hopanoids and contained the genes encoding the necessary biosynthetic enzymes. Our results show that 3-methylhopanoids can be produced under anoxic conditions and challenges the use of 3-methylhopanoids as biomarkers of oxic conditions in ancient rocks and as prima facie evidence that methanotrophic bacteria were active when the rocks were deposited.

Indexed as

AcetobacteraceaeAnaerobiosisBase CompositionPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNARNA, Ribosomal, 16SAnoxygenic phototrophsHopanoidsRhodopila globiformisWarm thermal springs

Identifiers

PMID34528111
PMCPMC8590665
OpenAlexW3150611268

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.