Evidence map›Paper›PMID 34526759›Full record

ArticleMolecular vision2021

A novel duplication involving

Kent W Small, Stijn Van de Sompele, Karen Nuytemans, Andrea Vincent, Ozge Ozalp Yuregir, Emine Ciloglu, Cahfer Sariyildiz, Toon Rosseel, Jessica Avetisjan, Nitin Udar and 4 more

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. A novelMolecular vision · 2024
    Article
  4. Article
  5. A letter to the editor regarding "A novel tandem duplication of PRDM13 in a Chinese family with North Carolina macular dystrophy".Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2023
    Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Kent W SmallMacula and Retina Institute, Glendale and Los Angeles, CA.
Stijn Van de SompeleCenter for Medical Genetics Ghent (CMGG), Department of Biomolecular Medicine, Ghent University and Ghent University Hospital, Ghent Belgium.
Karen NuytemansJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL.
Andrea VincentOphthalmology, New Zealand National Eye Centre, University of Auckland, New Zealand.
Ozge Ozalp YuregirUniversity of Health Sciences and Adana City Hospital, Adana, Turkey.
Emine CilogluUniversity of Health Sciences and Adana City Hospital, Adana, Turkey.
Cahfer SariyildizUniversity of Health Sciences and Adana City Hospital, Adana, Turkey.
Toon RosseelCenter for Medical Genetics Ghent (CMGG), Department of Biomolecular Medicine, Ghent University and Ghent University Hospital, Ghent Belgium.
Jessica AvetisjanMacula and Retina Institute, Glendale and Los Angeles, CA.
Nitin UdarMacula and Retina Institute, Glendale and Los Angeles, CA.
Jeffery M VanceJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL.
Margaret A Pericak-VanceJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL.
Elfride De BaereCenter for Medical Genetics Ghent (CMGG), Department of Biomolecular Medicine, Ghent University and Ghent University Hospital, Ghent Belgium.
Fadi S ShayaMacula and Retina Institute, Glendale and Los Angeles, CA.
Dr. John T. Macdonald Foundation · USUniversity of Auckland · NZUniversity of Miami · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: To clinically and molecularly investigate a new family with North Carolina macular dystrophy (NCMD) from Turkey, a previously unreported geographic origin for this phenotype. Methods: Clinical ophthalmic examinations, including fundus imaging and spectral domain-optical coherence tomography (SD-OCT), were performed on eight members of a two-generation non-consanguineous family from southern Turkey. Whole genome sequencing (WGS) was performed on two affected subjects, followed by variant filtering and copy number variant (CNV) analysis. Junction PCR and Sanger sequencing were used to confirm and characterize the duplication involving Results: The proband presented with lifelong bilateral vision impairment and displayed large grade 3 coloboma-like central macular lesions. Five of her six children showed similar macular malformations, consistent with autosomal dominant NCMD. The severity grades in the six affected individuals from two generations are not evenly distributed. CNV analysis of WGS data of the two affected family members, followed by junction PCR and Sanger sequencing, revealed a novel 56.2 kb tandem duplication involving Conclusions: We report a novel tandem duplication involving the

Indexed as

Gene DuplicationAdolescentAdultAsian PeopleChildChild, PreschoolChromosomes, Human, Pair 6Corneal Dystrophies, HereditaryFemaleGenetic LinkageHistone-Lysine N-MethyltransferaseHumansMalePedigreePolymerase Chain ReactionTomography, Optical CoherenceHistone-Lysine N-MethyltransferasePRDM13 protein, humanTranscription Factors

Identifiers

PMID34526759
PMCPMC8410230
OpenAlexW3201347301

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.