Evidence map›Paper›PMID 34523967›Full record

ArticleJournal of virology2021

Virulence of Enterovirus A71 Fluctuates Depending on the Phylogenetic Clade Formed in the Epidemic Year and Epidemic Region.

Kyousuke Kobayashi, Hidekazu Nishimura, Katsumi Mizuta, Tomoha Nishizawa, Son T Chu, Hiroshi Ichimura, Satoshi Koike

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Kyousuke KobayashiNeurovirology Project, Tokyo Metropolitan Institute of Medical Sciencegrid.272456.0, Tokyo, Japan.
Hidekazu NishimuraVirus Research Center, Clinical Research Division, Sendai Medical Centergrid.415495.8, Sendai, Japan.
Katsumi MizutaDepartment of Microbiology, Yamagata Prefectural Institute of Public Health, Yamagata, Japan.
Tomoha NishizawaNeurovirology Project, Tokyo Metropolitan Institute of Medical Sciencegrid.272456.0, Tokyo, Japan.
Son T ChuDepartment of Viral Infection and International Health, Graduate School of Medical Sciences, Kanazawa Universitygrid.9707.9, Kanazawa, Japan.
Hiroshi IchimuraDepartment of Viral Infection and International Health, Graduate School of Medical Sciences, Kanazawa Universitygrid.9707.9, Kanazawa, Japan.
Satoshi KoikeNeurovirology Project, Tokyo Metropolitan Institute of Medical Sciencegrid.272456.0, Tokyo, Japan.ORCID 0000-0002-2745-5254
Tokyo Metropolitan Institute of Medical Science · JPKanazawa University · JPSendai Medical Center · JPYamagata Prefectural Institute of Public Health · JP

Funding

Japan Agency for Medical Research and Development (AMED) 21fk0108084h1203MEXT | Japan Society for the Promotion of Science (JSPS) 18H026667MEXT | Japan Society for the Promotion of Science (JSPS) 19K07601
6 · The paper itself

Abstract

Although epidemics of hand, foot, and mouth disease (HFMD) caused by enterovirus A71 (EV-A71) have occurred worldwide, the Asia-Pacific region has seen large sporadic outbreaks with many severe neurological cases. This suggests that the virulence of the circulating viruses fluctuates in each epidemic and that HFMD outbreaks with many severe cases occur when highly virulent viruses are circulating predominantly, which has not been experimentally verified. Here, we analyzed 32 clinically isolated strains obtained in Japan from 2002 to 2013, along with 27 Vietnamese strains obtained from 2015 to 2016 that we characterized previously using human SCARB2 transgenic mice. Phylogenetic analysis of the P1 region classified them into five clades belonging to subgenogroup B5 (B5-I to B5-V) and five clades belonging to subgenogroup C4 (C4-I to C4-V) according to the epidemic year and region. Interestingly, clades B5-I and B5-II were very virulent, while clades B5-III, B5-IV, and B5-V were less virulent. Clades C4-II, C4-III, C4-IV, and C4-V were virulent, while clade C4-I was not. The result experimentally showed for the first time that several clades with different virulence levels emerged one after another. The experimental virulence evaluation of circulating viruses using SCARB2 transgenic mice is helpful to assess potential risks of circulating viruses. These results also suggest that a minor nucleotide or amino acid substitution in the EV-A71 genome during circulation causes fluctuations in virulence. The data presented here may increase our understanding of the dynamics of viral virulence during epidemics.

Indexed as

EpidemicsGenome, ViralPhylogenyAnimalsDisease OutbreaksEnterovirusEnterovirus A, HumanEnterovirus InfectionsFemaleHand, Foot and Mouth DiseaseHumansJapanMaleMiceMice, TransgenicMutationanimal modelenterovirusenterovirus A71epidemiologyHFMDneurovirulencevirulence

Identifiers

PMID34523967
PMCPMC8577370
OpenAlexW3200116946

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.