Evidence map›Paper›PMID 34523752›Full record

ArticleThe EMBO journal2021

MtNPF6.5 mediates chloride uptake and nitrate preference in Medicago roots.

Qiying Xiao, Yi Chen, Cheng-Wu Liu, Fran Robson, Sonali Roy, Xiaofei Cheng, Jiangqi Wen, Kirankumar Mysore, Anthony J Miller, Jeremy D Murray

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Root-specific expression ofHorticulture research · 2025
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Genome-Wide Analysis of theInternational journal of molecular sciences · 2023
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Root-Specific Expression ofFrontiers in plant science · 2022
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Qiying XiaoCAS-JIC Centre of Excellence for Plant and Microbial Science (CEPAMS), Centre for Excellence in Molecular Plant Sciences (CEMPS), Shanghai Institute of Plant Physiology and Ecology (SIPPE), Chinese Academy of Sciences, Shanghai, China.
Yi ChenJohn Innes Centre, Norwich Research Park, Norwich, UK.
Cheng-Wu LiuJohn Innes Centre, Norwich Research Park, Norwich, UK.ORCID 0000-0002-6650-6245
Fran RobsonJohn Innes Centre, Norwich Research Park, Norwich, UK.
Sonali RoyJohn Innes Centre, Norwich Research Park, Norwich, UK.
Xiaofei ChengNoble Research Institute, Ardmore, OK, USA.ORCID 0000-0001-9307-660X
Jiangqi WenNoble Research Institute, Ardmore, OK, USA.
Kirankumar MysoreNoble Research Institute, Ardmore, OK, USA.
Anthony J MillerJohn Innes Centre, Norwich Research Park, Norwich, UK.ORCID 0000-0003-0572-7607
Jeremy D MurrayCAS-JIC Centre of Excellence for Plant and Microbial Science (CEPAMS), Centre for Excellence in Molecular Plant Sciences (CEMPS), Shanghai Institute of Plant Physiology and Ecology (SIPPE), Chinese Academy of Sciences, Shanghai, China.ORCID 0000-0003-3000-9199
John Innes Centre · GBNoble Research Institute · USChinese Academy of Sciences · CN

Funding

Biotechnology and Biological Sciences Research Council BB/J004553/1Biotechnology and Biological Sciences Research Council BB/L010305/1Biotechnology and Biological Sciences Research Council BB/P012523/1Biotechnology and Biological Sciences Research Council BB/P012574/1
6 · The paper itself

Abstract

The preference for nitrate over chloride through regulation of transporters is a fundamental feature of plant ion homeostasis. We show that Medicago truncatula MtNPF6.5, an ortholog of Arabidopsis thaliana AtNPF6.3/NRT1.1, can mediate nitrate and chloride uptake in Xenopus oocytes but is chloride selective and that its close homologue, MtNPF6.7, can transport nitrate and chloride but is nitrate selective. The MtNPF6.5 mutant showed greatly reduced chloride content relative to wild type, and MtNPF6.5 expression was repressed by high chloride, indicating a primary role for MtNPF6.5 in root chloride uptake. MtNPF6.5 and MtNPF6.7 were repressed and induced by nitrate, respectively, and these responses required the transcription factor MtNLP1. Moreover, loss of MtNLP1 prevented the rapid switch from chloride to nitrate as the main anion in nitrate-starved plants after nitrate provision, providing insight into the underlying mechanism for nitrate preference. Sequence analysis revealed three sub-types of AtNPF6.3 orthologs based on their predicted substrate-binding residues: A (chloride selective), B (nitrate selective), and C (legume specific). The absence of B-type AtNPF6.3 homologues in early diverged plant lineages suggests that they evolved from a chloride-selective MtNPF6.5-like protein.

Indexed as

Gene Expression Regulation, PlantAnimalsAnion Transport ProteinsArabidopsisBiological EvolutionBiological TransportChloridesConserved SequenceHomeostasisMedicago truncatulaNitratesOocytesPhylogenyPlant ProteinsPlant RootsProtein BindingAnion Transport ProteinsChloridesNitratesNRT1.1 protein, ArabidopsisPlant ProteinsProtein IsoformsTranscription Factorschloride uptakeMtNLP1nitrate preferenceNPFNRT1.1

Identifiers

PMID34523752
PMCPMC8561640
OpenAlexW3201104289

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.