Evidence map›Paper›PMID 34523186›Full record

ArticleCancer science2021

Liquid biopsy of cerebrospinal fluid for MYD88 L265P mutation is useful for diagnosis of central nervous system lymphoma.

Yuki Yamagishi, Nobuyoshi Sasaki, Yoshiko Nakano, Yuko Matushita, Takaki Omura, Saki Shimizu, Kuniaki Saito, Keiichi Kobayashi, Yoshitaka Narita, Akihide Kondo and 3 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Cancer science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 51 citations in OpenAlex.

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  14. Liquid Biopsy in B and T Cell Lymphomas: From Bench to Bedside.International journal of molecular sciences · 2025
    Review
  15. Advances in Primary Central Nervous System Lymphoma.Current neurology and neuroscience reports · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Yuki YamagishiDivision of Brain Tumor Translational Research, National Cancer Center Research Institute, Chuo-ku, Tokyo, Japan.ORCID https://orcid.org/0000-0003-0111-2744
Nobuyoshi SasakiDepartment of Neurosurgery, Kyorin University Facility of Medicine, Mitaka-shi, Tokyo, Japan.
Yoshiko NakanoDivision of Brain Tumor Translational Research, National Cancer Center Research Institute, Chuo-ku, Tokyo, Japan.
Yuko MatushitaDivision of Brain Tumor Translational Research, National Cancer Center Research Institute, Chuo-ku, Tokyo, Japan.
Takaki OmuraDivision of Brain Tumor Translational Research, National Cancer Center Research Institute, Chuo-ku, Tokyo, Japan.
Saki ShimizuDepartment of Neurosurgery, Kyorin University Facility of Medicine, Mitaka-shi, Tokyo, Japan.
Kuniaki SaitoDepartment of Neurosurgery, Kyorin University Facility of Medicine, Mitaka-shi, Tokyo, Japan.
Keiichi KobayashiDepartment of Neurosurgery, Kyorin University Facility of Medicine, Mitaka-shi, Tokyo, Japan.
Yoshitaka NaritaDepartment of Neurosurgery and Neuro-Oncology, National Cancer Center Hospital, Chuo-ku, Tokyo, Japan.
Akihide KondoDepartment of Brain Disease Translational Research, Juntendo University Facility of Medicine, Bunkyo-ku, Tokyo, Japan.
Yoshiaki ShiokawaDepartment of Neurosurgery, Kyorin University Facility of Medicine, Mitaka-shi, Tokyo, Japan.
Motoo NaganeDepartment of Neurosurgery, Kyorin University Facility of Medicine, Mitaka-shi, Tokyo, Japan.ORCID https://orcid.org/0000-0002-0018-1652
Koichi IchimuraDivision of Brain Tumor Translational Research, National Cancer Center Research Institute, Chuo-ku, Tokyo, Japan.ORCID https://orcid.org/0000-0002-3851-2349
Kyorin University · JPJuntendo University · JPNational Cancer Center · USNational Cancer Research Institute · GB

Funding

Grants-in-Aid for Scientific Research (KAKENHI) (C) 17K10873
6 · The paper itself

Abstract

The current standard of diagnosing central nervous system (CNS) lymphoma is stereotactic biopsy, however the procedure has a risk of surgical complication. Liquid biopsy of the CSF is a less invasive, non-surgical method that can be used for diagnosing CNS lymphoma. In this study, we established a clinically applicable protocol for determining mutations in MYD88 in the CSF of patients with CNS lymphoma. CSF was collected prior to the start of chemotherapy from 42 patients with CNS lymphoma and matched tumor specimens. Mutations in MYD88 in 33 tumor samples were identified using pyrosequencing. Using 10 ng each of cellular DNA and cell-free DNA (cfDNA) extracted from the CSF, the MYD88 L265P mutation was detected using digital PCR. The conditions to judge mutation were rigorously determined. The median Target/Total value of cases with MYD88 mutations in the tumors was 5.1% in cellular DNA and 22.0% in cfDNA. The criteria to judge mutation were then determined, with a Target/Total value of 0.25% as the cutoff. When MYD88 mutations were determined based on these criteria, the sensitivity and specificity were 92.2% and 100%, respectively, with cellular DNA; and the sensitivity and specificity were 100% with cfDNA. Therefore, the DNA yield, mutated allele fraction, and accuracy were significantly higher in cfDNA compared with that in cellular DNA. Taken together, this study highlights the importance of detecting the MYD88 L265P mutation in cfDNA of the CSF for diagnosing CNS lymphoma using digital PCR, a highly accurate and clinically applicable method.

Indexed as

MutationAdultAgedAged, 80 and overCell-Free Nucleic AcidsCentral Nervous System NeoplasmsDNA, NeoplasmFemaleHigh-Throughput Nucleotide SequencingHumansLiquid BiopsyLymphomaMaleMiddle AgedMyeloid Differentiation Factor 88Polymerase Chain ReactionCell-Free Nucleic AcidsDNA, NeoplasmMyeloid Differentiation Factor 88central nervous system lymphomacerebrospinal fluiddigital PCRliquid biopsyMYD88

Identifiers

PMID34523186
PMCPMC8586690
OpenAlexW3200669063

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.