Evidence map›Paper›PMID 34521865›Full record

ArticleScientific reports2021

Confining Trypanosoma brucei in emulsion droplets reveals population variabilities in division rates and improves in vitro cultivation.

Simone H Oldenburg, Lionel Buisson, Thomas Beneyton, Deniz Pekin, Magali Thonnus, Frédéric Bringaud, Loïc Rivière, Jean-Christophe Baret

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Simone H OldenburgUniversité de Bordeaux, Centre National de la Recherche Scientifique, Centre de Recherche Paul Pascal, Unité Mixte de Recherche 5031, 33600, Pessac, France.
Lionel BuissonUniversité de Bordeaux, Centre National de la Recherche Scientifique, Centre de Recherche Paul Pascal, Unité Mixte de Recherche 5031, 33600, Pessac, France.
Thomas BeneytonUniversité de Bordeaux, Centre National de la Recherche Scientifique, Centre de Recherche Paul Pascal, Unité Mixte de Recherche 5031, 33600, Pessac, France.
Deniz PekinUniversité de Bordeaux, Centre National de la Recherche Scientifique, Centre de Recherche Paul Pascal, Unité Mixte de Recherche 5031, 33600, Pessac, France.
Magali ThonnusUniversité de Bordeaux, Centre National de la Recherche Scientifique, Microbiologie Fondamentale et Pathogénicité, Unité Mixte de Recherche 5234, 33076, Bordeaux, France.
Frédéric BringaudUniversité de Bordeaux, Centre National de la Recherche Scientifique, Microbiologie Fondamentale et Pathogénicité, Unité Mixte de Recherche 5234, 33076, Bordeaux, France.
Loïc RivièreUniversité de Bordeaux, Centre National de la Recherche Scientifique, Microbiologie Fondamentale et Pathogénicité, Unité Mixte de Recherche 5234, 33076, Bordeaux, France. loic.riviere@u-bordeaux.fr.
Jean-Christophe BaretUniversité de Bordeaux, Centre National de la Recherche Scientifique, Centre de Recherche Paul Pascal, Unité Mixte de Recherche 5031, 33600, Pessac, France. jean-christophe.baret@u-bordeaux.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trypanosome parasites are infecting mammals in Sub-Saharan Africa and are transmitted between hosts through bites of the tsetse fly. The transmission from the insect vector to the mammal host causes a number of metabolic and physiological changes. A fraction of the population continuously adapt to the immune system of the host, indicating heterogeneity at the population level. Yet, the cell to cell variability in populations is mostly unknown. We develop here an analytical method for quantitative measurements at the single cell level based on encapsulation and cultivation of single-cell Trypanosoma brucei in emulsion droplets. We first show that mammalian stage trypanosomes survive for several hours to days in droplets, with an influence of droplet size on both survival and growth. We unravel various growth patterns within a population and find that droplet cultivation of trypanosomes results in 10-fold higher cell densities of the highest dividing cell variants compared to standard cultivation techniques. Some variants reach final cell titers in droplets closer to what is observed in nature than standard culture, of practical interest for cell production. Droplet microfluidics is therefore a promising tool for trypanosome cultivation and analysis with further potential for high-throughput single cell trypanosome analysis.

Indexed as

Cell DivisionBiological Variation, PopulationEmulsionsMicrofluidicsSingle-Cell AnalysisTrypanosoma brucei bruceiEmulsions

Identifiers

PMID34521865
PMCPMC8440574

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.