Evidence map›Paper›PMID 34521831›Full record

ArticleNature communications2021

Intrinsically disordered protein biosensor tracks the physical-chemical effects of osmotic stress on cells.

Cesar L Cuevas-Velazquez, Tamara Vellosillo, Karina Guadalupe, Hermann Broder Schmidt, Feng Yu, David Moses, Jennifer A N Brophy, Dante Cosio-Acosta, Alakananda Das, Lingxin Wang and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 92 citations in OpenAlex.

  1. New perspectives on plant water sensing.Science China. Life sciences · 2026
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  11. The Analysis ofCurrent issues in molecular biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Cesar L Cuevas-VelazquezDepartment of Biology, Stanford University, Stanford, CA, 94305, USA. cuevas@quimica.unam.mx.ORCID 0000-0002-6629-6444
Tamara VellosilloDepartment of Biology, Stanford University, Stanford, CA, 94305, USA.
Karina GuadalupeCenter for Cellular and Biomolecular Machines (CCBM), University of California, Merced, CA, 95343, USA.
Hermann Broder SchmidtDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA, 94305, USA.ORCID 0000-0002-0750-8419
Feng YuCenter for Cellular and Biomolecular Machines (CCBM), University of California, Merced, CA, 95343, USA.ORCID 0000-0003-1755-5515
David MosesCenter for Cellular and Biomolecular Machines (CCBM), University of California, Merced, CA, 95343, USA.ORCID 0000-0002-5189-5188
Jennifer A N BrophyDepartment of Biology, Stanford University, Stanford, CA, 94305, USA.
Dante Cosio-AcostaDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, 62210, Mexico.
Alakananda DasDepartment of Molecular and Cellular Physiology, Stanford University, Stanford, CA, 94305, USA.
Lingxin WangDepartment of Molecular and Cellular Physiology, Stanford University, Stanford, CA, 94305, USA.
Alexander M JonesSainsbury Laboratory, Cambridge University, Cambridge, CB2 1LR, UK.ORCID 0000-0002-3662-2915
Alejandra A CovarrubiasDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, 62210, Mexico. alejandra.covarrubias@ibt.unam.mx.ORCID 0000-0003-0439-3414
Shahar SukenikCenter for Cellular and Biomolecular Machines (CCBM), University of California, Merced, CA, 95343, USA. ssukenik@ucmerced.edu.ORCID 0000-0003-3855-9574
José R DinnenyDepartment of Biology, Stanford University, Stanford, CA, 94305, USA. dinneny@stanford.edu.ORCID 0000-0002-3998-724X
Carnegie Institution for Science · USUniversity of California, Merced · USStanford University · USUniversidad Nacional Autónoma de México · MXUniversity of Cambridge · GB

Funding

Uncovering the structural underpinnings of function in disordered transcription factor regionsR35GM137926 · NIGMS · UNIVERSITY OF CALIFORNIA, MERCED · PI Shahar Sukenik · 2020 to 2026
$2.5M
Howard Hughes Medical InstituteNIGMS NIH HHS R35 GM137926
6 · The paper itself

Abstract

Cell homeostasis is perturbed when dramatic shifts in the external environment cause the physical-chemical properties inside the cell to change. Experimental approaches for dynamically monitoring these intracellular effects are currently lacking. Here, we leverage the environmental sensitivity and structural plasticity of intrinsically disordered protein regions (IDRs) to develop a FRET biosensor capable of monitoring rapid intracellular changes caused by osmotic stress. The biosensor, named SED1, utilizes the Arabidopsis intrinsically disordered AtLEA4-5 protein expressed in plants under water deficit. Computational modeling and in vitro studies reveal that SED1 is highly sensitive to macromolecular crowding. SED1 exhibits large and near-linear osmolarity-dependent changes in FRET inside living bacteria, yeast, plant, and human cells, demonstrating the broad utility of this tool for studying water-associated stress. This study demonstrates the remarkable ability of IDRs to sense the cellular environment across the tree of life and provides a blueprint for their use as environmentally-responsive molecular tools.

Indexed as

Biosensing TechniquesOsmotic PressureArabidopsisArabidopsis ProteinsBinding SitesCell Line, TumorEscherichia coliFluorescence Resonance Energy TransferGene ExpressionHumansIntrinsically Disordered ProteinsKineticsModels, MolecularMolecular ChaperonesOsmolar ConcentrationOsteoblastsArabidopsis ProteinsAT5G06760 protein, ArabidopsisIntrinsically Disordered ProteinsMolecular ChaperonesRecombinant ProteinsWater

Identifiers

PMID34521831
PMCPMC8440526
OpenAlexW3201228142

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.