Evidence map›Paper›PMID 34520545›Full record

ArticleNucleic acids research2021

Functional correction of CFTR mutations in human airway epithelial cells using adenine base editors.

Sateesh Krishnamurthy, Soumba Traore, Ashley L Cooney, Christian M Brommel, Katarina Kulhankova, Patrick L Sinn, Gregory A Newby, David R Liu, Paul B McCray

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 54 citations in OpenAlex.

  1. CRISPR for cystic fibrosis: Advances and insights from a systematic review.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Pooled it
  2. Article
  3. Considerations for early life genetic therapies in cystic fibrosis.American journal of physiology. Lung cellular and molecular physiology · 2026
    Review
  4. Article
  5. Review
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  7. Review
  8. Article
  9. Review
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  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Functional rescue of F508del-CFTR through revertant mutations introduced by CRISPR base editing.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sateesh KrishnamurthyDepartment of Pediatrics, University of Iowa, Iowa City, IA, USA.
Soumba TraoreDepartment of Pediatrics, University of Iowa, Iowa City, IA, USA.
Ashley L CooneyDepartment of Pediatrics, University of Iowa, Iowa City, IA, USA.
Christian M BrommelDepartment of Pediatrics, University of Iowa, Iowa City, IA, USA.
Katarina KulhankovaDepartment of Pediatrics, University of Iowa, Iowa City, IA, USA.
Patrick L SinnDepartment of Pediatrics, University of Iowa, Iowa City, IA, USA.
Gregory A NewbyMerkin Institute of Transformative Technologies in Healthcare, Broad Institute of Harvard and MIT, Cambridge, MA, USA.
David R LiuMerkin Institute of Transformative Technologies in Healthcare, Broad Institute of Harvard and MIT, Cambridge, MA, USA.
Paul B McCrayDepartment of Pediatrics, University of Iowa, Iowa City, IA, USA.
University of Iowa · USBroad Institute · USHarvard University · US

Funding

Vector Core-Core 2P30DK054759 · NIDDK · UNIVERSITY OF IOWA · PI Amy Leanne Ryan · 1998 to 2026
$30.5M
Center for Genomic Editing and Recording: Development and Application of Next-Generation Genome and Epigenome Editing Methods to Advance the Study and Treatment of Human DiseaseRM1HG009490 · NHGRI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI Brittany S. Adamson, Martin Joseph Ankrah Aryee · 2017 to 2026
$22.7M
Dissemination and Coordinating Center for the SCGE ConsortiumU24HG010423 · NHGRI · MEDICAL COLLEGE OF WISCONSIN · PI DWINELL, MELINDA R · 2019 to 2023
$15.0M
Pathology CoreP01HL152960 · NHLBI · UNIVERSITY OF IOWA · PI ENGELHARDT, JOHN F · 2020 to 2024
$11.6M
Integrating Chemistry and Evolution to Illuminate Biology and Enable Novel TherapeuticsR35GM118062 · NIGMS · HARVARD UNIVERSITY · PI LIU, DAVID R · 2016 to 2025
$6.4M
Life-long phenotypic correction of CF airwaysR01HL133089 · NHLBI · UNIVERSITY OF IOWA · PI PATRICK L SINN · 2017 to 2026
$5.3M
Efficient in Vivo RNP-based Gene Editing in the Sensory Organ Inner Ear Using Bioreducible Lipid NanoparticlesUG3TR002636 · NCATS · MASSACHUSETTS EYE AND EAR INFIRMARY · PI CHEN, ZHENG-YI, LIU, DAVID R · 2018 to 2020
$2.4M
SCGE Disease Models Studies Supplement: Repair of a CFTR Nonsense Mutation Using Adenine Base EditingUH3HL147366 · NHLBI · UNIVERSITY OF IOWA · PI MCCRAY, PAUL B · 2021 to 2022
$2.3M
Delivery Technologies for In Vivo Genome EditingUG3AI150551 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CHAIKOF, ELLIOT · 2019 to 2021
$2.3M
Expanding the Scope of Base EditingU01AI142756 · NIAID · BROAD INSTITUTE, INC. · PI LIU, DAVID R · 2018 to 2022
$2.1M
Delivery of CRISPR Ribonucleoproteins to Airway Epithelia Using Novel Amphiphilic PeptidesUG3HL147366 · NHLBI · UNIVERSITY OF IOWA · PI MCCRAY, PAUL B · 2018 to 2020
$2.1M
Howard Hughes Medical InstituteNCATS NIH HHS UG3 TR002636NHGRI NIH HHS RM1 HG009490NHGRI NIH HHS U24 HG010423NHLBI NIH HHS P01 HL152960NHLBI NIH HHS R01 HL133089NHLBI NIH HHS UG3 HL147366NHLBI NIH HHS UH3 HL147366NIAID NIH HHS U01 AI142756NIAID NIH HHS UG3 AI150551NIDDK NIH HHS P30 DK054759NIGMS NIH HHS R35 GM118062NIH HHS UG3 HL147366
6 · The paper itself

Abstract

Mutations in the CFTR gene that lead to premature stop codons or splicing defects cause cystic fibrosis (CF) and are not amenable to treatment by small-molecule modulators. Here, we investigate the use of adenine base editor (ABE) ribonucleoproteins (RNPs) that convert A•T to G•C base pairs as a therapeutic strategy for three CF-causing mutations. Using ABE RNPs, we corrected in human airway epithelial cells premature stop codon mutations (R553X and W1282X) and a splice-site mutation (3849 + 10 kb C > T). Following ABE delivery, DNA sequencing revealed correction of these pathogenic mutations at efficiencies that reached 38-82% with minimal bystander edits or indels. This range of editing was sufficient to attain functional correction of CFTR-dependent anion channel activity in primary epithelial cells from CF patients and in a CF patient-derived cell line. These results demonstrate the utility of base editor RNPs to repair CFTR mutations that are not currently treatable with approved therapeutics.

Indexed as

AdenineGene EditingCell LineCells, CulturedCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorHumansMutationRespiratory MucosaRibonucleoproteinsAdenineCystic Fibrosis Transmembrane Conductance RegulatorRibonucleoproteins

Identifiers

PMID34520545
PMCPMC8501978
OpenAlexW3199041997

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.