Evidence map›Paper›PMID 34520119›Full record

ArticleClinical and translational science2021

Nicotine metabolism and its association with CYP2A6 genotype among Indigenous people in Alaska who smoke.

Krista R Schaefer, Jaedon P Avey, Michael R Todd, Julie A Beans, Denise A Dillard, Laura M Shireman, Timothy A Thornton, Rachel F Tyndale, Kenneth E Thummel, Renee F Robinson and 1 more

Open access · goldAbstract read
In one paragraph

Article in Clinical and translational science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Observational
  3. Review
  4. Article
  5. Identification of Sociodemographic, Clinical, and Genetic Factors to Aid Alaska Native and American Indian People to Successfully Quit Smoking.Nicotine & tobacco research : official journal of the Society for Research on Nicotine and Tobacco · 2024
    Observational
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Krista R SchaeferResearch Department, Southcentral Foundation, Anchorage, Alaska, USA.ORCID 0000-0001-5300-1558
Jaedon P AveyResearch Department, Southcentral Foundation, Anchorage, Alaska, USA.ORCID 0000-0002-3858-0595
Michael R ToddResearch Department, Southcentral Foundation, Anchorage, Alaska, USA.ORCID 0000-0003-3414-0979
Julie A BeansResearch Department, Southcentral Foundation, Anchorage, Alaska, USA.ORCID 0000-0003-4363-9763
Denise A DillardResearch Department, Southcentral Foundation, Anchorage, Alaska, USA.
Laura M ShiremanDepartments of Pharmaceutics, University of Washington, Seattle, Washington, USA.ORCID 0000-0001-9207-3378
Timothy A ThorntonBiostatistics, University of Washington, Seattle, Washington, USA.ORCID 0000-0001-7071-2642
Rachel F TyndaleDepartments of Pharmacology and Toxicology, and Psychiatry, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0003-1297-2053
Kenneth E ThummelDepartments of Pharmaceutics, University of Washington, Seattle, Washington, USA.
Renee F RobinsonCollege of Pharmacy, Idaho State University, Pocatello, Idaho, USA.
Katrina G ClawDivision of Biomedical Informatics and Personalized Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.ORCID 0000-0003-2239-5018
Southcentral Foundation · USUniversity of Washington · USCentre for Addiction and Mental Health · CAIdaho State University · USUniversity of Colorado Anschutz Medical Campus · US

Funding

Vitamin K gene network: Variant discovery and characterizationP01GM116691 · NIGMS · UNIVERSITY OF WASHINGTON · PI THUMMEL, KENNETH E. · 2016 to 2020
$7.6M
Population-based Interventions to Improve Behavioral Health in a Tribal Healthcare SystemS06GM123545 · NIGMS · SOUTHCENTRAL FOUNDATION · PI DILLARD, DENISE A · 2017 to 2020
$1.6M
Variation of vitamin D metabolism and regulatory genes in the Yup’ik populationF32GM119237 · NIGMS · UNIVERSITY OF WASHINGTON · PI CLAW, KATRINA G · 2016 to 2018
$174k
AHRQ HHS F32 HS000079AHRQ HHS T32 HS000079CIHR FDN-154294NIGMS NIH HHS F32 GM119237NIGMS NIH HHS P01 GM116691NIGMS NIH HHS S06 GM123545NIH HHS F32 GM119237NIH HHS S06 GM106351NIH HHS U26 1IHS0079
6 · The paper itself

Abstract

Prevalence of smoking is higher in Alaska Native and American Indian (ANAI) populations living in Alaska than the general US population. Genetic factors contribute to smoking and cessation rates. The objective of this study was to compare CYP2A6 genetic variation and CYP2A6 enzyme activity toward nicotine in an ANAI population. ANAI (N = 151) people trying to quit smoking were recruited. DNA samples were genotyped for CYP2A6 variants *1X2A, *1B, *2, *4, *9, *10, *12, and *35. Multiple nicotine metabolites were measured in plasma and urine samples, including cotinine and 3'-hydroxycotinine used to determine CYP2A6 activity (e.g., nicotine metabolite ratio [NMR]). We calculated summary statistics for all of the genotypes and metabolites and assigned CYP2A6 activity scores based on known information. We studied the association of CYP2A6 variants with the NMR and smoking histories. The overall frequency of the CYP2A6*1B gain of function allele was high in the ANAI versus non-ANAI populations in other studies. Both *4 null and *9 decrease of function alleles had frequencies similar to previous studies of ANAI populations. In a multivariate analysis, the genotype-inferred CYP2A6 activity score was associated with both plasma and urine NMR (p value = 8.56E-08 and 4.08E-13, respectively). Plasma NMR was also associated with duration of smoking (p value < 0.01) but not urinary total nicotine equivalents uncorrected for creatinine (TNE9

Indexed as

Cytochrome P-450 CYP2A6GenotypeIndigenous PeoplesAdultAlaskaFemaleHumansMaleMiddle AgedNicotineCYP2A6 protein, humanCytochrome P-450 CYP2A6Nicotine

Identifiers

PMID34520119
PMCPMC8604252
OpenAlexW3199795788

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.