Evidence map›Paper›PMID 34519526›Full record

ArticlemSystems2021

Genomic Features Associated with the Degree of Phenotypic Resistance to Carbapenems in Carbapenem-Resistant Klebsiella pneumoniae.

Zackery P Bulman, Fiorella Krapp, Nathan B Pincus, Eric Wenzler, Katherine R Murphy, Chao Qi, Egon A Ozer, Alan R Hauser

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Comprehensive Genomic Analysis ofMicroorganisms · 2025
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  9. Cytotoxicity and virulence attributes ofRespiratory medicine case reports · 2025
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  10. Article
  11. Article
  12. Article
  13. Article
  14. Carbapenem-resistantJAC-antimicrobial resistance · 2024
    Article
  15. Phenotypes of amSystems · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. A cluster of six respiratory cultures positive forJournal of clinical tuberculosis and other mycobacterial diseases · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Zackery P Bulman *Department of Pharmacy Practice, University of Illinois at Chicagogrid.185648.6, Chicago, Illinois, USA.ORCID 0000-0002-5396-911X
Fiorella Krapp *Department of Medicine, Division of Infectious Diseases, Northwestern Universitygrid.16753.36 Feinberg School of Medicine, Chicago, Illinois, USA.ORCID 0000-0002-8404-2827
Nathan B PincusDepartment of Microbiology-Immunology, Northwestern Universitygrid.16753.36 Feinberg School of Medicine, Chicago, Illinois, USA.ORCID 0000-0002-3134-7176
Eric WenzlerDepartment of Pharmacy Practice, University of Illinois at Chicagogrid.185648.6, Chicago, Illinois, USA.ORCID 0000-0003-3914-8400
Katherine R MurphyDepartment of Microbiology-Immunology, Northwestern Universitygrid.16753.36 Feinberg School of Medicine, Chicago, Illinois, USA.
Chao QiDepartment of Pathology, Northwestern Universitygrid.16753.36 Feinberg School of Medicine, Chicago, Illinois, USA.
Egon A Ozer *Department of Medicine, Division of Infectious Diseases, Northwestern Universitygrid.16753.36 Feinberg School of Medicine, Chicago, Illinois, USA.
Alan R Hauser *Department of Medicine, Division of Infectious Diseases, Northwestern Universitygrid.16753.36 Feinberg School of Medicine, Chicago, Illinois, USA.ORCID 0000-0003-4596-7939
Northwestern University · USUniversity of Illinois Chicago · US

Funding

Technology CoreU19AI135964 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI ALAN R HAUSER · 2018 to 2026
$24.7M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008152 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI ARDEHALI, HOSSEIN · 1987 to 2021
$24.0M
Institutional Career DevelopmentKL2TR002002 · NCATS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI PHILLIPS, SHANE A · 2016 to 2024
$6.8M
Population Analysis of Pseudomonas aeruginosa VirulenceR01AI118257 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI HAUSER, ALAN R · 2016 to 2025
$4.9M
Novel Strategies for Antibiotic Combinations to Combat Gram-negative SuperbugsR01AI148560 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI BULITTA, JURGEN BERND, TSUJI, BRIAN · 2020 to 2024
$3.9M
Biomarkers for Highly Virulent Pseudomonas aeruginosa StrainsR21AI129167 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI HAUSER, ALAN R · 2017 to 2018
$570k
Chicago Biomedical ConsortiumHHS | National Institutes of Health (NIH) K24AI04831HHS | National Institutes of Health (NIH) R01AI118257HHS | National Institutes of Health (NIH) R01AI148560HHS | National Institutes of Health (NIH) R21AI129167HHS | National Institutes of Health (NIH) T32GM008152HHS | National Institutes of Health (NIH) U19AI135964NCATS NIH HHS KL2 TR002002NIAID NIH HHS R01 AI118257NIAID NIH HHS R01 AI148560NIAID NIH HHS R21 AI129167NIAID NIH HHS U19 AI135964NIGMS NIH HHS T32 GM008152
6 · The paper itself

Abstract

Carbapenem-resistant Klebsiella pneumoniae strains cause severe infections that are difficult to treat. The production of carbapenemases such as the K. pneumoniae carbapenemase (KPC) is a common mechanism by which these strains resist killing by the carbapenems. However, the degree of phenotypic carbapenem resistance (MIC) may differ markedly between isolates with similar carbapenemase genes, suggesting that our understanding of the underlying mechanisms of carbapenem resistance remains incomplete. To address this problem, we determined the whole-genome sequences of 166 K. pneumoniae clinical isolates resistant to meropenem, imipenem, or ertapenem. Multiple linear regression analysis of this collection of largely

Indexed as

antibiotic resistancecarbapenemKlebsiella pneumoniaemachine learningwhole-genome sequencing

Identifiers

PMID34519526
PMCPMC8547452
OpenAlexW3200719277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.