Evidence map›Paper›PMID 34519438›Full record

ArticleMolecular genetics & genomic medicine2021

Novel variants in KAT6B spectrum of disorders expand our knowledge of clinical manifestations and molecular mechanisms.

Megan Yabumoto, Jessica Kianmahd, Meghna Singh, Maria F Palafox, Angela Wei, Kathryn Elliott, Dana H Goodloe, S Joy Dean, Catherine Gooch, Brianna K Murray and 35 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

45 authors at 16 institutions in 1 country.

Megan YabumotoDepartment of Human Genetics, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.
Jessica KianmahdDivision of Medical Genetics, Department of Pediatrics, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.
Meghna SinghDepartment of Human Genetics, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.
Maria F PalafoxDepartment of Human Genetics, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.
Angela WeiDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.
Kathryn ElliottDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.
Dana H GoodloeDepartment of Genetics, University of Alabama at Birmingham, Birmingham, Alabama, USA.
S Joy DeanDepartment of Genetics, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Catherine GoochDepartment of Pediatrics, Washington University School of Medicine in St. Louis, St. Louis, Missouri, USA.
Brianna K MurrayDivision of Medical Genetics and Metabolism, Children's Hospital of The King's Daughters, Norfolk, Virginia, USA.
Erin SwartzDivision of Medical Genetics and Metabolism, Children's Hospital of The King's Daughters, Norfolk, Virginia, USA.
Samantha A Schrier VerganoDivision of Medical Genetics and Metabolism, Children's Hospital of The King's Daughters, Norfolk, Virginia, USA.
Meghan C TowneAmbry Genetics Corp, Aliso Viejo, California, USA.ORCID 0000-0001-9460-2368
Kimberly NugentDepartment of Pediatrics, Baylor College of Medicine, San Antonio, Texas, USA.
Elizabeth R RoederDepartment of Pediatrics, Baylor College of Medicine, San Antonio, Texas, USA.
Christina KresgeDepartment of Pediatrics, Division of Clinical Genetics, Rutgers New Jersey Medical School, Newark, New Jersey, USA.
Beth A PletcherDepartment of Pediatrics, Division of Clinical Genetics, Rutgers New Jersey Medical School, Newark, New Jersey, USA.
Katheryn GrandDepartment of Pediatrics, Cedars-Sinai Medical Center, Los Angeles, California, USA.
John M GrahamDepartment of Pediatrics, Cedars-Sinai Medical Center, Los Angeles, California, USA.ORCID 0000-0003-4297-1078
Ryan GatesDepartment of Pediatrics, Division of Medical Genetics, Stanford University, Stanford, California, USA.
Natalia Gomez-OspinaDepartment of Pediatrics, Division of Medical Genetics, Stanford University, Stanford, California, USA.
Subhadra RamanathanDepartment of Pediatrics, Division of Medical Genetics, Loma Linda University Children's Hospital, Loma Linda, California, USA.
Robin Dawn ClarkDepartment of Pediatrics, Division of Medical Genetics, Loma Linda University Children's Hospital, Loma Linda, California, USA.
Kimberly GlaserDivision of Genetics, Joe DiMaggio Children's Hospital, Hollywood, Florida, USA.
Paul J BenkeDivision of Genetics, Joe DiMaggio Children's Hospital, Hollywood, Florida, USA.
Julie S CohenDepartment of Neurology and Developmental Medicine, Kennedy Krieger Institute, Baltimore, Maryland, USA.
Ali FatemiDepartment of Neurology and Developmental Medicine, Kennedy Krieger Institute, Baltimore, Maryland, USA.
Weiyi MuDepartment of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Kristin W BarananoDepartment of Neurology, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Jill A MaddenDivision of Genetics and Genomics, Department of Pediatrics, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Cynthia S GubbelsDivision of Genetics and Genomics, Department of Pediatrics, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Timothy W YuDivision of Genetics and Genomics, Department of Pediatrics, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Pankaj B AgrawalDivision of Genetics and Genomics, Department of Pediatrics, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Mary-Kathryn ChambersDivision of Human Genetics, Warren Alpert Medical School of Brown University, Hasbro Children's Hospital/Rhode Island Hospital, Providence, Rhode Island, USA.
Chanika PhornphutkulDivision of Human Genetics, Warren Alpert Medical School of Brown University, Hasbro Children's Hospital/Rhode Island Hospital, Providence, Rhode Island, USA.
John A PughDivision of Child Neurology, Department of Neurology, Albany Medical Center, Albany, New York, USA.
Kate A TauberDivision of Neonatology, Department of Pediatrics, Albany Medical Center, Bernard and Millie Duker Children's Hospital, Albany, New York, USA.
Svetlana AzovaDivision of Endocrinology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Jessica R SmithDivision of Endocrinology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Anne O'Donnell-LuriaDivision of Genetics and Genomics, Department of Pediatrics, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Hannah MedskerDepartment of Neurology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Siddharth SrivastavaDepartment of Neurology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Deborah KrakowDepartment of Human Genetics, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.
Daniela N SchweitzerDivision of Medical Genetics, Department of Pediatrics, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.
Valerie A ArboledaDepartment of Human Genetics, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.ORCID 0000-0002-9687-9122
Boston Children's Hospital · USUniversity of California, Los Angeles · USChildren's Hospital of The King's Daughters · USAlbany Medical Center Hospital · USBaylor College of Medicine · USBrown University · USCedars-Sinai Medical Center · USJoe DiMaggio Children's Hospital · USJohns Hopkins University · USKennedy Krieger Institute · USLoma Linda University Children's Hospital · USRutgers, The State University of New Jersey · USStanford University · USUniversity of Alabama at Birmingham · USAmbry Genetics (United States) · USWashington University in St. Louis · US

Funding

Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI Hisashi Umemori · 2021 to 2026
$9.4M
Unraveling correlations between Mendelian and common disease using functional genomicsDP5OD024579 · OD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ARBOLEDA, VALERIE A · 2017 to 2021
$1.9M
Dissecting the spectrum of genetic architectures underlying congenital heart defects.R03HL150604 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ARBOLEDA, VALERIE A · 2020 to 2021
$312k
NHLBI NIH HHS R03 HL150604NICHD NIH HHS P50 HD105351NIH HHS DP5 OD024579
6 · The paper itself

Abstract

The phenotypic variability associated with pathogenic variants in Lysine Acetyltransferase 6B (KAT6B, a.k.a. MORF, MYST4) results in several interrelated syndromes including Say-Barber-Biesecker-Young-Simpson Syndrome and Genitopatellar Syndrome. Here we present 20 new cases representing 10 novel KAT6B variants. These patients exhibit a range of clinical phenotypes including intellectual disability, mobility and language difficulties, craniofacial dysmorphology, and skeletal anomalies. Given the range of features previously described for KAT6B-related syndromes, we have identified additional phenotypes including concern for keratoconus, sensitivity to light or noise, recurring infections, and fractures in greater numbers than previously reported. We surveyed clinicians to qualitatively assess the ways families engage with genetic counselors upon diagnosis. We found that 56% (10/18) of individuals receive diagnoses before the age of 2 years (median age = 1.96 years), making it challenging to address future complications with limited accessible information and vast phenotypic severity. We used CRISPR to introduce truncating variants into the KAT6B gene in model cell lines and performed chromatin accessibility and transcriptome sequencing to identify key dysregulated pathways. This study expands the clinical spectrum and addresses the challenges to management and genetic counseling for patients with KAT6B-related disorders.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseMutationPhenotypeAbnormalities, MultipleAllelesBlepharophimosisCohort StudiesCongenital HypothyroidismCraniofacial AbnormalitiesFaciesGenetic CounselingGenetic LociGenotypeHeart Defects, CongenitalHistone AcetyltransferasesHistone AcetyltransferasesKAT6B protein, humanCRISPRGenitopatellar syndromeKAT6B-related disordersphenotypic spectrumSay-Barber-Biesecker-Young-Simpson syndromevariable expressivity, rare genetic diagnosis

Identifiers

PMID34519438
PMCPMC8580094
OpenAlexW3200730467

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.