Evidence map›Paper›PMID 34519271›Full record

ArticleeLife2021

Cryo-EM reveals new species-specific proteins and symmetry elements in the

Michael J Sheedlo, Clarissa L Durie, Jeong Min Chung, Louise Chang, Jacquelyn Roberts, Michele Swanson, Dana Borden Lacy, Melanie D Ohi

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Conformational transitions enabling interkingdom transfer of effector multitudes.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. In situ structures of theProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. OptimizedMicrobiology spectrum · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Journal of bacteriology · 2024
    Review
  14. Membrane association and polar localization of theProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Subdomains of theLife science alliance · 2024
    Article
  16. Review
  17. Article
  18. Comparative Analysis of T4SS Molecular Architectures.Journal of microbiology and biotechnology · 2023
    Review
  19. Article
  20. Role of the CagY antenna projection inInfection and immunity · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Michael J Sheedlo *Department of Pharmacology, University of Minnesota, Minneapolis, United States.ORCID 0000-0002-3185-1727
Clarissa L Durie *Life Sciences Institute, University of Michigan, Ann Arbor, United States.ORCID 0000-0002-4027-4386
Jeong Min ChungLife Sciences Institute, University of Michigan, Ann Arbor, United States.ORCID 0000-0002-4285-8764
Louise ChangLife Sciences Institute, University of Michigan, Ann Arbor, United States.
Jacquelyn RobertsLife Sciences Institute, University of Michigan, Ann Arbor, United States.
Michele SwansonDepartment of Microbiology and Immunology, University Of Michigan, Ann Arbor, United States.ORCID 0000-0003-2542-0266
Dana Borden LacyDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, United States.ORCID 0000-0003-2273-8121
Melanie D OhiLife Sciences Institute, University of Michigan, Ann Arbor, United States.ORCID 0000-0003-1750-4793
University of Michigan · USUniversity of Minnesota · USVA Tennessee Valley Healthcare System · US

Funding

TRD #3: An automated and streamlined pipeline for in-situ molecular microscopyP41GM103310 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI KIEFT, JEFFREY S · 2012 to 2021
$14.7M
TRAINING IN GASTROENTEROLOGYT32DK007673 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 1992 to 2026
$8.4M
Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
Type IV Protein Secretion in Helicobacter pyloriR01AI118932 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COVER, TIMOTHY L, OHI, MELANIE DIANE · 2016 to 2025
$6.7M
ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
Compute Cluster for in vitro and in situ Analysis of Molecular MachinesS10OD030275 · OD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OHI, MELANIE DIANE · 2021 to 2021
$600k
Silicon Mechanics Compute ClusterS10OD020011 · OD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SKINIOTIS, GEORGIOS · 2015 to 2015
$490k
Exploring protein translocation by the Legionella pneumophila Dot/Icm Type IV Section SystemR21AI164651 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OHI, MELANIE DIANE · 2021 to 2022
$429k
Structural and functional studies of the Legionella pneumophila dot T4SSF32AI150027 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DURIE, CLARISSA LYNN · 2020 to 2021
$131k
Defining the mechanism of protein translocation using a bacterial exotoxin as a model systemK99AI154672 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SHEEDLO, MICHAEL J. · 2020 to 2020
$94k
NIAID NIH HHS F32 AI150027NIAID NIH HHS K99 AI154672NIAID NIH HHS R01 AI118932NIAID NIH HHS R21 AI164651NIDDK NIH HHS T32 DK007673NIGMS NIH HHS P41 GM103311NIGMS NIH HHS R01 GM129325NIH HHS S10 OD020011NIH HHS S10 OD030275
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Bacterial ProteinsCryoelectron MicroscopyLegionella pneumophilaProtein ConformationSpecies SpecificityType IV Secretion SystemsBacterial ProteinsType IV Secretion Systemscryo-electron microscopyinfectious diseaseLegionella pneumophilamicrobiologytype IV secretion system

Identifiers

PMID34519271
PMCPMC8486379
OpenAlexW3199374241

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.