Evidence map›Paper›PMID 34518217›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

TBK1 and IKKε act like an OFF switch to limit NLRP3 inflammasome pathway activation.

Fabian A Fischer, Linda F M Mies, Sohaib Nizami, Eirini Pantazi, Sara Danielli, Benjamin Demarco, Michael Ohlmeyer, Michelle Sue Jann Lee, Cevayir Coban, Jonathan C Kagan and 2 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Cell Type-Specific Roles of TBK1 in Steatotic Liver Disease: Evidence for an Inflammatory TBK1Liver international : official journal of the International Association for the Study of the Liver · 2026
    Article
  3. Article
  4. Molecular mechanisms of NLRP3 inflammasome activation.Experimental & molecular medicine · 2026
    Review
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  19. Article
  20. The NLRP3 inflammasome: activation and regulation.Trends in biochemical sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Fabian A FischerThe Kennedy Institute of Rheumatology, University of Oxford, Oxford OX3 7FY, United Kingdom.
Linda F M MiesThe Kennedy Institute of Rheumatology, University of Oxford, Oxford OX3 7FY, United Kingdom.
Sohaib NizamiAlzheimer's Research UK Oxford Drug Discovery Institute, University of Oxford, Oxford OX3 7FZ, United Kingdom.ORCID 0000-0002-6322-3688
Eirini PantaziThe Kennedy Institute of Rheumatology, University of Oxford, Oxford OX3 7FY, United Kingdom.ORCID 0000-0001-8309-0440
Sara DanielliThe Kennedy Institute of Rheumatology, University of Oxford, Oxford OX3 7FY, United Kingdom.ORCID 0000-0003-4608-5751
Benjamin DemarcoThe Kennedy Institute of Rheumatology, University of Oxford, Oxford OX3 7FY, United Kingdom.ORCID 0000-0002-5537-1381
Michael OhlmeyerIcahn School of Medicine at Mount Sinai, New York, NY 10029.ORCID 0000-0003-1412-543X
Michelle Sue Jann LeeDivision of Malaria Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.ORCID 0000-0002-2694-0549
Cevayir CobanDivision of Malaria Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.ORCID 0000-0002-4467-7799
Jonathan C KaganDivision of Gastroenterology, Boston Children's Hospital, Harvard Medical School, Boston, MA 02115.ORCID 0000-0003-2364-2746
Elena Di DanielAlzheimer's Research UK Oxford Drug Discovery Institute, University of Oxford, Oxford OX3 7FZ, United Kingdom; Elena.Di-Daniel@astx.com jelena.bezbradica@kennedy.ox.ac.uk.ORCID 0000-0002-0535-2123
Jelena S BezbradicaThe Kennedy Institute of Rheumatology, University of Oxford, Oxford OX3 7FY, United Kingdom; Elena.Di-Daniel@astx.com jelena.bezbradica@kennedy.ox.ac.uk.ORCID 0000-0003-1441-1727
University of Oxford · GBThe University of Tokyo · JPBoston Children's Hospital · USIcahn School of Medicine at Mount Sinai · US

Funding

Medical Research Council MR/S000623/1Medical Research Council MR/W001217/1
6 · The paper itself

Abstract

NACHT, LRR, and PYD domains-containing protein 3 (NLRP3) inflammasome activation is beneficial during infection and vaccination but, when uncontrolled, is detrimental and contributes to inflammation-driven pathologies. Hence, discovering endogenous mechanisms that regulate NLRP3 activation is important for disease interventions. Activation of NLRP3 is regulated at the transcriptional level and by posttranslational modifications. Here, we describe a posttranslational phospho-switch that licenses NLRP3 activation in macrophages. The ON switch is controlled by the protein phosphatase 2A (PP2A) downstream of a variety of NLRP3 activators in vitro and in lipopolysaccharide-induced peritonitis in vivo. The OFF switch is regulated by two closely related kinases, TANK-binding kinase 1 (TBK1) and I-kappa-B kinase epsilon (IKKε). Pharmacological inhibition of TBK1 and IKKε, as well as simultaneous deletion of TBK1 and IKKε, but not of either kinase alone, increases NLRP3 activation. In addition, TBK1/IKKε inhibitors counteract the effects of PP2A inhibition on inflammasome activity. We find that, mechanistically, TBK1 interacts with NLRP3 and controls the pathway activity at a site distinct from NLRP3-serine 3, previously reported to be under PP2A control. Mutagenesis of NLRP3 confirms serine 3 as an important phospho-switch site but, surprisingly, reveals that this is not the sole site regulated by either TBK1/IKKε or PP2A, because all retain the control over the NLRP3 pathway even when serine 3 is mutated. Altogether, a model emerges whereby TLR-activated TBK1 and IKKε act like a "parking brake" for NLRP3 activation at the time of priming, while PP2A helps remove this parking brake in the presence of NLRP3 activating signals, such as bacterial pore-forming toxins or endogenous danger signals.

Indexed as

AnimalsCell LineFemaleHumansI-kappa B KinaseInflammasomesMacrophagesMaleMiceMice, Inbred C57BLMice, KnockoutNLR Family, Pyrin Domain-Containing 3 ProteinPhosphorylationProtein Serine-Threonine KinasesSignal TransductionI-kappa B KinaseIKBKE protein, humanInflammasomesNLR Family, Pyrin Domain-Containing 3 ProteinNLRP3 protein, humanProtein Serine-Threonine KinasesTBK1 protein, humanIKKεmacrophagesNLRP3 inflammasomePP2ATBK1

Identifiers

PMID34518217
PMCPMC8463895
OpenAlexW3199129719

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.