Evidence map›Paper›PMID 34517831›Full record

ArticleBMC plant biology2021

Transcriptome analysis of Pará rubber tree (H. brasiliensis) seedlings under ethylene stimulation.

Yoshimi Nakano, Nobutaka Mitsuda, Kohei Ide, Teppei Mori, Farida Rosana Mira, Syofi Rosmalawati, Norie Watanabe, Kaoru Suzuki

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  7. Brassinosteroids Regulate the Water Deficit and Latex Yield of Rubber Trees.International journal of molecular sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yoshimi NakanoBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, 305-8566, Japan.
Nobutaka MitsudaBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, 305-8566, Japan.
Kohei IdeBridgestone Corporation, Kodaira, Tokyo, 187-8531, Japan.
Teppei MoriBridgestone Corporation, Kodaira, Tokyo, 187-8531, Japan.
Farida Rosana MiraLaboratory for Biotechnology, Agency for the Assessment and Application of Technology, Build. 630, Puspiptek area, Serpong, Tangerang, Selatan, 15314, Indonesia.
Syofi RosmalawatiLaboratory for Biotechnology, Agency for the Assessment and Application of Technology, Build. 630, Puspiptek area, Serpong, Tangerang, Selatan, 15314, Indonesia.
Norie WatanabeBridgestone Corporation, Kodaira, Tokyo, 187-8531, Japan.
Kaoru SuzukiBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, 305-8566, Japan. kaoru-suzuki@aist.go.jp.
Bridgestone (Japan) · JPNational Institute of Advanced Industrial Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNatural rubber (cis-1,4-polyioprene, NR) is an indispensable industrial raw material obtained from the Pará rubber tree (H. brasiliensis). Natural rubber cannot be replaced by synthetic rubber compounds because of the superior resilience, elasticity, abrasion resistance, efficient heat dispersion, and impact resistance of NR. In NR production, latex is harvested by periodical tapping of the trunk bark. Ethylene enhances and prolongs latex flow and latex regeneration. Ethephon, which is an ethylene-releasing compound, applied to the trunk before tapping usually results in a 1.5- to 2-fold increase in latex yield. However, intense mechanical damage to bark tissues by excessive tapping and/or over-stimulation with ethephon induces severe oxidative stress in laticifer cells, which often causes tapping panel dryness (TPD) syndrome. To enhance NR production without causing TPD, an improved understanding of the molecular mechanism of the ethylene response in the Pará rubber tree is required. Therefore, we investigated gene expression in response to ethephon treatment using Pará rubber tree seedlings as a model system.

resultsAfter ethephon treatment, 3270 genes showed significant differences in expression compared with the mock treatment. Genes associated with carotenoids, flavonoids, and abscisic acid biosynthesis were significantly upregulated by ethephon treatment, which might contribute to an increase in latex flow. Genes associated with secondary cell wall formation were downregulated, which might be because of the reduced sugar supply. Given that sucrose is an important molecule for NR production, a trade-off may arise between NR production and cell wall formation for plant growth and for wound healing at the tapping panel.

conclusionsDynamic changes in gene expression occur specifically in response to ethephon treatment. Certain genes identified may potentially contribute to latex production or TPD suppression. These data provide valuable information to understand the mechanism of ethylene stimulation, and will contribute to improved management practices and/or molecular breeding to attain higher yields of latex from Pará rubber trees.

Indexed as

Gene Expression ProfilingCrops, AgriculturalEthylenesGene Expression Regulation, PlantGenes, PlantHeveaIndonesiaLatexSeedlingsEthylenesLatexEthyleneH. brasiliensisMicroarrayNatural rubberPará rubber tree

Identifiers

PMID34517831
PMCPMC8436496
OpenAlexW3199221169

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.