Evidence map›Paper›PMID 34517763›Full record

ArticlemBio2021

TnCentral: a Prokaryotic Transposable Element Database and Web Portal for Transposon Analysis.

Karen Ross, Alessandro M Varani, Erik Snesrud, Hongzhan Huang, Danillo Oliveira Alvarenga, Jian Zhang, Cathy Wu, Patrick McGann, Mick Chandler

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed
8.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed, 163 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. GlobalEnvironmental science and ecotechnology · 2026
    Article
  9. Article
  10. Genomic diversity ofMicrobial genomics · 2026
    Article
  11. Article
  12. Article
  13. Article
  14. Complete genome sequence ofMicrobiology resource announcements · 2026
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Cross-sectoral sharing of CTX-M-producingMicrobiology spectrum · 2026
    Article
  20. Article

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Karen Ross *Protein Information Resource, Department of Biochemistry and Molecular and Cellular Biology, Georgetown University Medical Center, Washington, DC, USA.ORCID 0000-0003-4633-6055
Alessandro M Varani *School of Agricultural and Veterinary Sciences, Universidade Estadual Paulista, Jaboticabal, Sao Paulo, Brazil.ORCID 0000-0002-8876-3269
Erik SnesrudMultidrug-Resistant Organism Repository and Surveillance Network, Walter Reed Army Institute of Research, Silver Spring, Maryland, USA.
Hongzhan HuangProtein Information Resource, Center for Bioinformatics and Computational Biology, University of Delawaregrid.33489.35, Newark, Delaware, USA.
Danillo Oliveira AlvarengaSchool of Agricultural and Veterinary Sciences, Universidade Estadual Paulista, Jaboticabal, Sao Paulo, Brazil.ORCID 0000-0002-3666-2220
Jian ZhangProtein Information Resource, Department of Biochemistry and Molecular and Cellular Biology, Georgetown University Medical Center, Washington, DC, USA.
Cathy WuProtein Information Resource, Center for Bioinformatics and Computational Biology, University of Delawaregrid.33489.35, Newark, Delaware, USA.ORCID 0000-0001-6379-8601
Patrick McGannMultidrug-Resistant Organism Repository and Surveillance Network, Walter Reed Army Institute of Research, Silver Spring, Maryland, USA.ORCID 0000-0003-1548-9438
Mick ChandlerDepartment of Biochemistry and Molecular and Cellular Biology, Georgetown University Medical Center, Washington, DC, USA.ORCID 0000-0002-0292-6662
Georgetown University · USUniversidade Estadual Paulista (Unesp) · BRUniversity of Delaware · USWalter Reed Army Institute of Research · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe here the structure and organization of TnCentral (https://tncentral.proteininformationresource.org/ [or the mirror link at https://tncentral.ncc.unesp.br/]), a web resource for prokaryotic transposable elements (TE). TnCentral currently contains ∼400 carefully annotated TE, including transposons from the Tn

Indexed as

Databases, GeneticDNA Transposable ElementsBacteriaComputational BiologyInternetSoftwareWeb BrowserDNA Transposable Elementsantibiotic resistancedatabasegenome evolutioninsertion sequenceintegronsmobile genetic elementsplasmid-mediated resistancetransposition mechanismstransposonsvirulence

Identifiers

PMID34517763
PMCPMC8546635
OpenAlexW3199421355

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.