Evidence map›Paper›PMID 34515920›Full record

ArticleMolecular biology reports2021

Transcriptomic assessment of dietary fishmeal partial replacement by soybean meal and prebiotics inclusion in the liver of juvenile Pacific yellowtail (Seriola lalandi).

Oscar E Juárez, Fabiola Lafarga-De la Cruz, Juan Pablo Lazo, Rigoberto Delgado-Vega, Denisse Chávez-García, Edgar López-Landavery, Dariel Tovar-Ramírez, Clara Elizabeth Galindo-Sánchez

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Article in Molecular biology reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Oscar E JuárezDepartment of Marine Biotechnology, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Carretera Ensenada-Tijuana #3918, Zona Playitas, 22860, Ensenada, Baja California, México.
Fabiola Lafarga-De la CruzDepartment of Aquaculture, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Carretera Ensenada-Tijuana #3918, Zona Playitas, 22860, Ensenada, Baja California, México.
Juan Pablo LazoDepartment of Aquaculture, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Carretera Ensenada-Tijuana #3918, Zona Playitas, 22860, Ensenada, Baja California, México.
Rigoberto Delgado-VegaDepartment of Aquaculture, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Carretera Ensenada-Tijuana #3918, Zona Playitas, 22860, Ensenada, Baja California, México.
Denisse Chávez-GarcíaDepartment of Aquaculture, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Carretera Ensenada-Tijuana #3918, Zona Playitas, 22860, Ensenada, Baja California, México.
Edgar López-LandaveryDepartment of Marine Biotechnology, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Carretera Ensenada-Tijuana #3918, Zona Playitas, 22860, Ensenada, Baja California, México.
Dariel Tovar-RamírezAquaculture Program, Centro de Investigaciones Biológicas del Noroeste (CIBNOR), Av. Instituto Politécnico Nacional #195, Playa Palo de Santa Rita Sur, 23096, La Paz, Baja California Sur, México.
Clara Elizabeth Galindo-SánchezDepartment of Marine Biotechnology, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Carretera Ensenada-Tijuana #3918, Zona Playitas, 22860, Ensenada, Baja California, México. cgalindo@cicese.mx.ORCID http://orcid.org/0000-0001-7514-2327
Centro de Investigación Científica y de Educación Superior de Ensenada · MX

Funding

Centro de Investigación Científica y de Educación Superior de Ensenada, Baja California 682136, 623159
6 · The paper itself

Abstract

backgroundSeriola lalandi is an important species for aquaculture, due to its rapid growth, adaptation to captivity and formulated diets, and high commercial value. Due to the rise in fishmeal (FM) price, efforts have been and still are made to replace it partially or entirely with vegetable meals in diets for carnivorous fish. The use of prebiotics when feeding vegetable meals has improved fish health.

methodsFour experimental diets were assessed in juveniles, the control diet consisted of FM as the main protein source, the second diet included 2% of GroBiotic®-A (FM-P), in the third diet FM was partially replaced (25%) by soybean meal (SM25), and the fourth consisted of SM25 with 2% of GroBiotic®-A (SM25-P). Growth was evaluated and RNA-seq of the liver tissue was performed, including differential expression analysis and functional annotation to identify genes affected by the diets.

resultsGrowth was not affected by this level of FM replacement, but it was improved by prebiotics. Annotation was achieved for 59,027 transcripts. Gene expression was affected by the factors: 225 transcripts due to FM replacement, 242 due to prebiotics inclusion, and 62 due to the interaction of factors. The SM25-P diet showed the least amount of differentially expressed genes against the control diet.

conclusionThe replacement of FM (25%) by soybean meal combined with prebiotics (2%) represents a good cost-benefit balance for S. lalandi juveniles since the fish growth increased and important metabolic and immune system genes in the liver were upregulated with this diet.

Indexed as

Animal FeedGlycine maxPrebioticsTranscriptomeAnimalsLiverPerciformesPrebioticsFishmeal replacementGene expressionGrowthLiver transcriptomePrebiotics

Identifiers

PMID34515920
OpenAlexW3155059909

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.