Evidence map›Paper›PMID 34514470›Full record

ArticleConnectomics in neuroImaging : third International Workshop, CNI 2019, held in conjunction with MICCAI 2019, Shenzhen, China, October 13, 2019, Proceedings. CNI (Workshop) (3rd : 2019 : Shenzhen Shi, China)2019

Rapid Acceleration of the Permutation Test via Transpositions.

Moo K Chung, Linhui Xie, Shih-Gu Huang, Yixian Wang, Jingwen Yan, Li Shen

Abstract read
In one paragraph

Article in Connectomics in neuroImaging : third International Workshop, CNI 2019, held in conjunction with MICCAI 2019, Shenzhen, China, October 13, 2019, Proceedings. CNI (Workshop) (3rd : 2019 : Shenzhen Shi, China), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Hodge Laplacian of Brain Networks.IEEE transactions on medical imaging · 2023
    Article
  8. TOPOLOGICAL LEARNING FOR BRAIN NETWORKS.The annals of applied statistics · 2023
    Article
  9. Article
  10. Fast mesh data augmentation via Chebyshev polynomial of spectral filtering.Neural networks : the official journal of the International Neural Network Society · 2021
    Article
  11. Lattice Paths for Persistent Diagrams.Interpretability of Machine Intelligence in Medical Image Computing, and Topological Data Analysis and Its Applications for Medical Data : 4th International Workshop, iMIMIC 2021, and 1st International Workshop, TDA4MedicalData 2021, He... · 2021
    Article
  12. Topological Learning and Its Application to Multimodal Brain Network Integration.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Moo K ChungUniversity of Wisconsin, Madison, USA.
Linhui XieIndiana University-Purdue University Indianapolis, Indianapolis, USA.
Shih-Gu HuangUniversity of Wisconsin, Madison, USA.
Yixian WangUniversity of Wisconsin, Madison, USA.
Jingwen YanIndiana University-Purdue University Indianapolis, Indianapolis, USA.
Li ShenUniversity of Pennsylvania, Philadelphia, USA.

Funding

Integrative Bioinformatics Approaches to Human Brain Genomics and ConnectomicsR01EB022574 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI SHEN, LI · 2016 to 2019
$1.9M
BRAIN Initiative: Theories, Models and Methods for Analysis of Complex Data from the BrainR01EB022856 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI CHUNG, MOO K · 2016 to 2018
$1.1M
NIBIB NIH HHS R01 EB022574NIBIB NIH HHS R01 EB022856
6 · The paper itself

Abstract

The permutation test is an often used test procedure for determining statistical significance in brain network studies. Unfortunately, generating every possible permutation for large-scale brain imaging datasets such as HCP and ADNI with hundreds of subjects is not practical. Many previous attempts at speeding up the permutation test rely on various approximation strategies such as estimating the tail distribution with known parametric distributions. In this study, we propose the novel transposition test that exploits the underlying algebraic structure of the permutation group. The method is applied to a large number of diffusion tensor images in localizing the regions of the brain network differences.

Indexed as

Online statistics computationPermutation groupPermutation testStructural brain networksTransposition test

Identifiers

PMID34514470
PMCPMC8428155

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.