Evidence map›Paper›PMID 34513223›Full record

ArticleBiomedical optics express2021

Computational framework for generating large panoramic super-resolution images from localization microscopy.

Yue Du, Chenze Wang, Chen Zhang, Lingyun Guo, Yanzhu Chen, Meng Yan, Qianghui Feng, Mingtao Shang, Weibing Kuang, Zhengxia Wang and 1 more

Abstract read
In one paragraph

Article in Biomedical optics express, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yue DuBritton Chance Center and MoE Key Laboratory for Biomedical Photonics, School of Engineering Sciences, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan 430074, China.
Chenze WangSchool of Computer Science and Technology, Hainan University, Haikou 570228, China.
Chen ZhangBritton Chance Center and MoE Key Laboratory for Biomedical Photonics, School of Engineering Sciences, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan 430074, China.
Lingyun GuoSchool of Computer Science and Technology, Hainan University, Haikou 570228, China.
Yanzhu ChenSchool of Computer Science and Technology, Hainan University, Haikou 570228, China.
Meng YanSchool of Computer Science and Technology, Hainan University, Haikou 570228, China.
Qianghui FengSchool of Computer Science and Technology, Hainan University, Haikou 570228, China.
Mingtao ShangBritton Chance Center and MoE Key Laboratory for Biomedical Photonics, School of Engineering Sciences, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan 430074, China.
Weibing KuangBritton Chance Center and MoE Key Laboratory for Biomedical Photonics, School of Engineering Sciences, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan 430074, China.
Zhengxia WangSchool of Computer Science and Technology, Hainan University, Haikou 570228, China.
Zhen-Li HuangSchool of Biomedical Engineering, Hainan University, Haikou 570228, China.ORCID https://orcid.org/0000-0003-2400-966X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Combining super-resolution localization microscopy with pathology creates new opportunities for biomedical researches. This combination requires a suitable image mosaic method for generating a panoramic image from many overlapping super-resolution images. However, current image mosaic methods are not suitable for this purpose. Here we proposed a computational framework and developed an image mosaic method called NanoStitcher. We generated ground truth datasets and defined criteria to evaluate this computational framework. We used both simulated and experimental datasets to prove that NanoStitcher exhibits better performance than two representative image mosaic methods. This study is helpful for the mature of super-resolution digital pathology.

Identifiers

PMID34513223
PMCPMC8407827

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.