Evidence map›Paper›PMID 34507994›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Optimal ligand discrimination by asymmetric dimerization and turnover of interferon receptors.

Patrick Binder, Nikolas D Schnellbächer, Thomas Höfer, Nils B Becker, Ulrich S Schwarz

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  5. Proofreading does not result in more reliable ligand discrimination in receptor signaling due to its inherent stochasticity.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Patrick BinderInstitute for Theoretical Physics, Heidelberg University, 69120 Heidelberg, Germany.ORCID 0000-0001-9989-1226
Nikolas D SchnellbächerInstitute for Theoretical Physics, Heidelberg University, 69120 Heidelberg, Germany.ORCID 0000-0001-8095-9382
Thomas HöferBioQuant-Center for Quantitative Biology, Heidelberg University, 69120 Heidelberg, Germany.
Nils B BeckerBioQuant-Center for Quantitative Biology, Heidelberg University, 69120 Heidelberg, Germany; schwarz@thphys.uni-heidelberg.de nils.becker@dkfz-heidelberg.de.ORCID 0000-0002-7490-6425
Ulrich S SchwarzInstitute for Theoretical Physics, Heidelberg University, 69120 Heidelberg, Germany; schwarz@thphys.uni-heidelberg.de nils.becker@dkfz-heidelberg.de.ORCID 0000-0003-1483-640X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In multicellular organisms, antiviral defense mechanisms evoke a reliable collective immune response despite the noisy nature of biochemical communication between tissue cells. A molecular hub of this response, the interferon I receptor (IFNAR), discriminates between ligand types by their affinity regardless of concentration. To understand how ligand type can be decoded robustly by a single receptor, we frame ligand discrimination as an information-theoretic problem and systematically compare the major classes of receptor architectures: allosteric, homodimerizing, and heterodimerizing. We demonstrate that asymmetric heterodimers achieve the best discrimination power over the entire physiological range of local ligand concentrations. This design enables sensing of ligand presence and type, and it buffers against moderate concentration fluctuations. In addition, receptor turnover, which drives the receptor system out of thermodynamic equilibrium, allows alignment of activation points for ligands of different affinities and thereby makes ligand discrimination practically independent of concentration. IFNAR exhibits this optimal architecture, and our findings thus suggest that this specialized receptor can robustly decode digital messages carried by its different ligands.

Indexed as

AnimalsComputational BiologyDimerizationHumansImmunityInterferon-alphaLigandsModels, TheoreticalProtein BindingReceptors, InterferonSignal TransductionInterferon-alphaLigandsReceptors, Interferoncell–cell communicationimmune responseinformation theoryrobust sensingsignal transduction

Identifiers

PMID34507994
PMCPMC8449373

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.