Evidence map›Paper›PMID 34505622›Full record

ArticleJournal of experimental botany2022

Functional characterization of a cellulose synthase, CtCESA1, from the marine red alga Calliarthron tuberculosum (Corallinales).

Jan Xue, Pallinti Purushotham, Justin F Acheson, Ruoya Ho, Jochen Zimmer, Ciaran McFarlane, Filip Van Petegem, Patrick T Martone, A Lacey Samuels

Open access · greenAbstract read
In one paragraph

Article in Journal of experimental botany, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Jan XueDepartment of Botany, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada.
Pallinti PurushothamDepartment of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA 22908, USA.
Justin F AchesonDepartment of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA 22908, USA.
Ruoya HoDepartment of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA 22908, USA.
Jochen ZimmerDepartment of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA 22908, USA.
Ciaran McFarlaneDepartment of Biochemistry, University of British Columbia, Vancouver, BC, V6T 1Z3, Canada.
Filip Van PetegemDepartment of Biochemistry, University of British Columbia, Vancouver, BC, V6T 1Z3, Canada.
Patrick T MartoneDepartment of Botany, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada.
A Lacey SamuelsDepartment of Botany, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada.ORCID 0000-0002-0606-8933
University of British Columbia · CAUniversity of Virginia · US

Funding

Structural investigation of the multi-membrane spanning bacterial cellulose synthase (Bcs) supramolecular complexF32GM126647 · NIGMS · UNIVERSITY OF VIRGINIA · PI ACHESON, JUSTIN FINLEY · 2017 to 2017
$57k
NIGMS NIH HHS F32 GM126647NIH HHS 1F32GM126647-01
6 · The paper itself

Abstract

In land plants and algae, cellulose is important for strengthening cell walls and preventing breakage due to physical forces. Though our understanding of cellulose production by cellulose synthases (CESAs) has seen significant advances for several land plant and bacterial species, functional characterization of this fundamental protein is absent in red algae. Here we identify CESA gene candidates in the calcifying red alga Calliarthron tuberculosum using sequence similarity-based approaches, and elucidate their phylogenetic relationship with other CESAs from diverse taxa. One gene candidate, CtCESA1, was closely related to other putative red algal CESA genes. To test if CtCESA1 encoded a true cellulose synthase, CtCESA1 protein was expressed and purified from insect and yeast expression systems. CtCESA1 showed glucan synthase activity in glucose tracer assays. CtCESA1 activity was relatively low when compared with plant and bacterial CESA activity. In an in vitro assay, a predicted N-terminal starch-binding domain from CtCESA1 bound red algal floridean starch extracts, representing a unique domain in red algal CESAs not present in CESAs from other lineages. When the CtCESA1 gene was introduced into Arabidopsis thaliana cesa mutants, the red algal CtCESA1 partially rescued the growth defects of the primary cell wall cesa6 mutant, but not cesa3 or secondary cell wall cesa7 mutants. A fluorescently tagged CtCESA1 localized to the plasma membrane in the Arabidopsis cesa6 mutant background. This study presents functional evidence validating the sequence annotation of red algal CESAs. The relatively low activity of CtCESA1, partial complementation in Arabidopsis, and presence of unique protein domains suggest that there are probably functional differences between the algal and land plant CESAs.

Indexed as

GlucosyltransferasesRhodophytaCell WallPhylogenycellulose synthaseGlucosyltransferasesArabidopsisCalliarthroncellulose synthasefloridean starchglucan synthasered algaRhodophyta

Identifiers

PMID34505622
PMCPMC8793875
OpenAlexW3197057210

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.