Evidence map›Paper›PMID 34505339›Full record

ArticleAngewandte Chemie (International ed. in English)2021

High-Throughput Single-Cell Mass Spectrometry Reveals Abnormal Lipid Metabolism in Pancreatic Ductal Adenocarcinoma.

Qinlei Liu, Wenjie Ge, Tongtong Wang, Jiayi Lan, Sandra Martínez-Jarquín, Christian Wolfrum, Markus Stoffel, Renato Zenobi

Open access · hybridAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
4.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 66 citations in OpenAlex.

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  18. Role ofQuantitative biology (Beijing, China) · 2024
    Article
  19. bioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Qinlei LiuDepartment of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 3, 8093, Zurich, Switzerland.
Wenjie GeDepartment of Biology, ETH Zurich, Otto-Stern-Weg 7, 8093, Zurich, Switzerland.
Tongtong WangDepartment of Health Sciences and Technology, ETH Zurich, Schorenstrasse 16, 8603, Schwerzenbach, Switzerland.
Jiayi LanDepartment of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 3, 8093, Zurich, Switzerland.
Sandra Martínez-JarquínDepartment of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 3, 8093, Zurich, Switzerland.
Christian WolfrumDepartment of Health Sciences and Technology, ETH Zurich, Schorenstrasse 16, 8603, Schwerzenbach, Switzerland.
Markus StoffelDepartment of Biology, ETH Zurich, Otto-Stern-Weg 7, 8093, Zurich, Switzerland.
Renato ZenobiDepartment of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 3, 8093, Zurich, Switzerland.ORCID 0000-0001-5211-4358
ETH Zurich · CH

Funding

China Scholarship Council 201906240053
6 · The paper itself

Abstract

Even populations of clonal cells are heterogeneous, which requires high-throughput analysis methods with single-cell sensitivity. Here, we propose a rapid, label-free single-cell analytical method based on active capillary dielectric barrier discharge ionization mass spectrometry, which can analyze multiple metabolites in single cells at a rate of 38 cells/minute. Multiple cell types (HEK-293T, PANC-1, CFPAC-1, H6c7, HeLa and iBAs) were discriminated successfully. We found evidence for abnormal lipid metabolism in pancreatic cancer cells. We also analyzed gene expression in a cancer genome atlas dataset and found that the mRNA level of a critical enzyme of lipid synthesis (ATP citrate lyase, ACLY) was upregulated in human pancreatic ductal adenocarcinoma (PDAC). Moreover, both an ACLY chemical inhibitor and a siRNA approach targeting ACLY could suppress the viability of PDAC cells. A significant reduction in lipid content in treated cells indicates that ACLY could be a potential target for treating pancreatic cancer.

Indexed as

Mass SpectrometryMetabolomeATP Citrate (pro-S)-LyaseCarcinoma, DuctalCell Line, TumorCell SurvivalDiscriminant AnalysisHEK293 CellsHigh-Throughput Screening AssaysHumansLipidsPancreatic NeoplasmsRNA InterferenceRNA, Small InterferingSingle-Cell AnalysisATP Citrate (pro-S)-LyaseLipidsRNA, Small InterferingATP citrate lyasedielectric barrier dischargeionization sourceslipid metabolismsingle-cell mass spectrometry

Identifiers

PMID34505339
PMCPMC8597026
OpenAlexW3160721338

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.