Evidence map›Paper›PMID 34504306›Full record

ArticleLaboratory investigation; a journal of technical methods and pathology2021

ZKSCAN3 in severe bacterial lung infection and sepsis-induced immunosuppression.

Xiaosen Ouyang, Eugene Becker, Nathaniel B Bone, Michelle S Johnson, Jason Craver, Wei-Xing Zong, Victor M Darley-Usmar, Jaroslaw W Zmijewski, Jianhua Zhang

Open access · greenAbstract read
In one paragraph

Article in Laboratory investigation; a journal of technical methods and pathology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Splenic PD-L1Research (Washington, D.C.) · 2026
    Article
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  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. World journal of gastroenterology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Xiaosen Ouyang *Department of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.
Eugene Becker *Department of Medicine, University of Alabama at Birmingham, Birmingham, AL, USA.
Nathaniel B Bone *Department of Medicine, University of Alabama at Birmingham, Birmingham, AL, USA.
Michelle S JohnsonDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.
Jason CraverDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.
Wei-Xing ZongDepartment of Chemical Biology, Rutgers University, Piscataway, NJ, USA.
Victor M Darley-UsmarDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA.
Jaroslaw W ZmijewskiCenter for Free Radical Biology, University of Alabama at Birmingham, Birmingham, AL, USA. jaroslowzmijewski@uabmc.edu.
Jianhua ZhangDepartment of Pathology, University of Alabama at Birmingham, Birmingham, AL, USA. jianhuazhang@uabmc.edu.ORCID 0000-0002-2128-9574
University of Alabama at Birmingham · USRutgers, The State University of New Jersey · US

Funding

Translational Research Support CoreP30ES005022 · NIEHS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI PANOS G. GEORGOPOULOS · 1988 to 2026
$47.4M
Sex hormones and arthritis in a long lived animal modelP30AG050886 · NIA · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DAVID B ALLISON · 2015 to 2026
$11.3M
Protein and redox homeostasis in cancer development and therapyR01CA129536 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI ZONG, WEI-XING · 2008 to 2022
$4.8M
Glutamine synthetase in cancer cell metabolism and oncogenesisR01CA224550 · NCI · RUTGERS, THE STATE UNIV OF N.J. · PI Wei-Xing Zong · 2018 to 2026
$4.7M
AMPK in the Development and Resolution of Lung FibrosisR01HL139617 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Victor J. Thannickal, Jaroslaw Waldemar Zmijewski · 2019 to 2026
$4.4M
PI3 kinase PIK3CB (p110beta) in membrane trafficking and metabolismR01CA232246 · NCI · RUTGERS, THE STATE UNIV OF N.J. · PI ZONG, WEI-XING · 2018 to 2022
$1.8M
Phosphatidylinositol 3-kinases and AutophagyR01GM097355 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI ZONG, WEI-XING · 2012 to 2015
$1.5M
BLRD VA I01 BX003056NCI NIH HHS R01 CA129536NCI NIH HHS R01 CA224550NCI NIH HHS R01 CA232246NHLBI NIH HHS R01 HL139617NIA NIH HHS P30 AG050886NIEHS NIH HHS P30 ES005022NIGMS NIH HHS R01 GM097355
6 · The paper itself

Abstract

The mortality rates among patients who initially survive sepsis are, in part, associated with a high risk of secondary lung infections and respiratory failure. Given that phagolysosomes are important for intracellular killing of pathogenic microbes, we investigated how severe lung infections associated with post-sepsis immunosuppression affect phagolysosome biogenesis. In mice with P. aeruginosa-induced pneumonia, we found a depletion of both phagosomes and lysosomes, as evidenced by decreased amounts of microtubule associated protein light chain 3-II (LC3-II) and lysosomal-associated membrane protein (LAMP1). We also found a loss of transcription factor E3 (TFE3) and transcription factor EB (TFEB), which are important activators for transcription of genes encoding autophagy and lysosomal proteins. These events were associated with increased expression of ZKSCAN3, a repressor for transcription of genes encoding autophagy and lysosomal proteins. Zkscan3

Indexed as

AnimalsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsImmune ToleranceLungMaleMiceMice, Inbred C57BLPhagosomesPneumonia, BacterialPseudomonas aeruginosaPseudomonas InfectionsSepsisTranscription FactorsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsTcfe3 protein, mouseTcfeb protein, mouseTranscription FactorsZKSCAN3 protein, mouse

Identifiers

PMID34504306
PMCPMC8868012
OpenAlexW3196686054

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.