Evidence map›Paper›PMID 34504243›Full record

ArticleScientific reports2021

Analysis of the application of a gene chip method for detecting Mycobacterium tuberculosis drug resistance in clinical specimens: a retrospective study.

Gang Feng, Wenhao Han, Jinyan Shi, Rongrong Xia, Jianchun Xu

Abstract readEvaluation StudyMulticenter Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Rapid Extensively Drug-Resistant (XDR) TB Diagnosis: An In-House DNA Biochip for Drug Resistance Detection and Mutation Profiling ofThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2026
    Article
  3. Review
  4. Rapid detection of rifampin resistance inMicrobiology spectrum · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Identification ofInfection and drug resistance · 2024
    Review
  9. Review
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Gang Feng *The Fourth People's Hospital of Lianyungang City, Lianyungang, 222000, Jiangsu Province, China. 731093109@qq.com.
Wenhao Han *Haibin Rehabilitation Hospital, Lianyungang, Jiangsu Province, China.
Jinyan Shi *The Fourth People's Hospital of Lianyungang City, Lianyungang, 222000, Jiangsu Province, China.
Rongrong Xia *The Fourth People's Hospital of Lianyungang City, Lianyungang, 222000, Jiangsu Province, China.
Jianchun Xu *The Fourth People's Hospital of Lianyungang City, Lianyungang, 222000, Jiangsu Province, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most Mycobacterium tuberculosis (Mtb) resistant to rifampicin (RIF) has mutations in the rpoB gene, while most Mtb resistant to isoniazid (INH) has mutations in the katG gene or inhA promoter. We used gene chip technology to detect mutations in these genes to determine the resistance of Mtb to RIF and INH. A total of 4148 clinical specimens with sputum smear positivity for acid-fast bacilli (AFB) were detected. Then, taking the results of the drug sensitivity test (DST) as the reference standard, the detection efficiency of sputum samples from different grades of positive smears was compared in detail. We found that the sensitivity of the gene chip method for detecting sputum samples with a grade ≥ AFB 2 + was higher than that of sputum samples with a grade ≤ AFB 1 + (P < 0.05). When the grade of the sample was ≤ AFB 1 +, the sensitivity of the gene chip method was 72.6% for RIF, 67.3% for INH, and 60.0% for MDR-TB. When the grade of the sample was ≥ AFB 2 +, the sensitivity of the gene chip method was 84.5% for RIF, 78.2% for INH, and 73.9% for MDR-TB. The results show that gene chip technology can be directly used to diagnose drug-resistant tuberculosis in clinical specimens, and the diagnostic efficiency for the detection of sputum specimens with a grade ≥ AFB 2 + is better than that of other sputum specimens.

Indexed as

MutationAntibiotics, AntitubercularBacterial ProteinsCatalaseCodonDNA-Directed RNA PolymerasesDrug Resistance, Multiple, BacterialHumansIsoniazidMicrobial Sensitivity TestsMycobacterium tuberculosisOligonucleotide Array Sequence AnalysisOxidoreductasesRetrospective StudiesRifampinSensitivity and SpecificityAntibiotics, AntitubercularBacterial ProteinsCatalaseCodonDNA-Directed RNA PolymerasesInhA protein, MycobacteriumIsoniazidkatG protein, Mycobacterium tuberculosisOxidoreductasesRifampinrpoB protein, Mycobacterium tuberculosis

Identifiers

PMID34504243
PMCPMC8429459

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.