Evidence map›Paper›PMID 34502139›Full record

ArticleInternational journal of molecular sciences2021

Phosphorylation of SARS-CoV-2 Orf9b Regulates Its Targeting to Two Binding Sites in TOM70 and Recruitment of Hsp90.

Lukas Brandherm, Antonio Mario Kobaš, Mara Klöhn, Yannick Brüggemann, Stephanie Pfaender, Joachim Rassow, Sebastian Kreimendahl

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

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  17. Innate immune evasion strategies of SARS-CoV-2.Nature reviews. Microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Lukas BrandhermInstitute for Biochemistry and Pathobiochemistry, Ruhr-University Bochum, 44801 Bochum, Germany.ORCID 0000-0002-3231-6312
Antonio Mario KobašInstitute for Biochemistry and Pathobiochemistry, Ruhr-University Bochum, 44801 Bochum, Germany.
Mara KlöhnDepartment of Molecular & Medical Virology, Ruhr-University Bochum, 44801 Bochum, Germany.ORCID 0000-0002-7707-2040
Yannick BrüggemannDepartment of Molecular & Medical Virology, Ruhr-University Bochum, 44801 Bochum, Germany.ORCID 0000-0002-8790-0022
Stephanie PfaenderDepartment of Molecular & Medical Virology, Ruhr-University Bochum, 44801 Bochum, Germany.
Joachim RassowInstitute for Biochemistry and Pathobiochemistry, Ruhr-University Bochum, 44801 Bochum, Germany.ORCID 0000-0002-1219-2623
Sebastian KreimendahlInstitute for Biochemistry and Pathobiochemistry, Ruhr-University Bochum, 44801 Bochum, Germany.
Ruhr University Bochum · DE

Funding

Medical Faculty, Ruhr-University Bochum, FoRUM grant F1014-2021
6 · The paper itself

Abstract

SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) is the causative agent of the COVID19 pandemic. The SARS-CoV-2 genome encodes for a small accessory protein termed Orf9b, which targets the mitochondrial outer membrane protein TOM70 in infected cells. TOM70 is involved in a signaling cascade that ultimately leads to the induction of type I interferons (IFN-I). This cascade depends on the recruitment of Hsp90-bound proteins to the N-terminal domain of TOM70. Binding of Orf9b to TOM70 decreases the expression of IFN-I; however, the underlying mechanism remains elusive. We show that the binding of Orf9b to TOM70 inhibits the recruitment of Hsp90 and chaperone-associated proteins. We characterized the binding site of Orf9b within the C-terminal domain of TOM70 and found that a serine in position 53 of Orf9b and a glutamate in position 477 of TOM70 are crucial for the association of both proteins. A phosphomimetic variant Orf9b

Indexed as

AnimalsBinding SitesChlorocebus aethiopsCoronavirus Nucleocapsid ProteinsCOVID-19HSP90 Heat-Shock ProteinsHumansInterferon Type IMitochondrial Membrane Transport ProteinsMitochondrial Precursor Protein Import Complex ProteinsMutationPhosphoproteinsPhosphorylationProtein BindingProtein DomainsRecombinant ProteinsCoronavirus Nucleocapsid ProteinsHSP90 Heat-Shock ProteinsInterferon Type IMitochondrial Membrane Transport ProteinsMitochondrial Precursor Protein Import Complex Proteinsnucleocapsid phosphoprotein, SARS-CoV-2PhosphoproteinsRecombinant ProteinsTOMM70 protein, humanB.1.1.7COVID19Hsp90interferonmitochondriaOrf9bSARS-CoV-2TOM70variant of concern

Identifiers

PMID34502139
PMCPMC8430508
OpenAlexW3194009333

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.