Evidence map›Paper›PMID 34499625›Full record

ArticleThe Journal of clinical investigation2021

Recipient APOL1 risk alleles associate with death-censored renal allograft survival and rejection episodes.

Zhongyang Zhang, Zeguo Sun, Jia Fu, Qisheng Lin, Khadija Banu, Kinsuk Chauhan, Marina Planoutene, Chengguo Wei, Fadi Salem, Zhengzi Yi and 14 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. Update on APOL1 and chronic kidney diseases in children.Pediatric nephrology (Berlin, Germany) · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Should Nephrology Clinical Trials Account for Apolipoprotein L1 Gene Risk Status?Clinical journal of the American Society of Nephrology : CJASN · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Kidney medicine · 2025
    Review
  14. Article
  15. Review
  16. Genetics in Kidney Diseases.Advances in kidney disease and health · 2025
    Review
  17. Genetic ancestry, proportion of African ancestry, and apolipoprotein L1 risk variants in kidney recipients.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2024
    Article
  18. Genetic versus self-reported African ancestry of the recipient and neighborhood predictors of kidney transplantation outcomes in 2 multiethnic urban cohorts.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2024
    Article
  19. Article
  20. Monogenic Kidney Diseases in Kidney Transplantation.Kidney international reports · 2024
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 5 institutions in 3 countries.

Zhongyang ZhangDepartment of Genetics and Genomic Sciences.
Zeguo SunDivision of Nephrology, Department of Medicine, and.
Jia FuDivision of Nephrology, Department of Medicine, and.
Qisheng LinDivision of Nephrology, Department of Medicine, and.
Khadija BanuDivision of Nephrology, Department of Medicine, and.
Kinsuk ChauhanDivision of Nephrology, Department of Medicine, and.
Marina PlanouteneDivision of Nephrology, Department of Medicine, and.
Chengguo WeiDivision of Nephrology, Department of Medicine, and.
Fadi SalemDepartment of Pathology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Zhengzi YiDivision of Nephrology, Department of Medicine, and.
Ruijie LiuDivision of Nephrology, Department of Medicine, and.
Paolo CravediDivision of Nephrology, Department of Medicine, and.
Haoxiang ChengDepartment of Genetics and Genomic Sciences.
Ke HaoDepartment of Genetics and Genomic Sciences.
Philip J O'ConnellWestmead Institute for Medical Research, University of Sydney, New South Wales, Australia.
Shuta IshibeDepartment of Medicine, Yale University School of Medicine, New Haven, Connecticut, USA.
Weijia ZhangDivision of Nephrology, Department of Medicine, and.
Steven G CocaDivision of Nephrology, Department of Medicine, and.
Ian W GibsonDepartment of Pathology, University of Manitoba, Winnipeg, Manitoba, Canada.
Robert B ColvinDepartment of Pathology, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA.
John Cijiang HeDivision of Nephrology, Department of Medicine, and.
Peter S HeegerDivision of Nephrology, Department of Medicine, and.
Barbara MurphyDivision of Nephrology, Department of Medicine, and.
Madhav C MenonDivision of Nephrology, Department of Medicine, and.
Yale University · USHarvard University · USIcahn School of Medicine at Mount Sinai · USThe University of Sydney · AUUniversity of Manitoba · CA

Funding

Noninvasive Markers and Transplant Outcome in HumansU01AI063594 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HEEGER, PETER SCOTT · 2004 to 2022
$66.5M
Precision IBD via genetics and genomics: integrating International and multi-omic datasets, expanding studies in diverse populations, and defining mechanisms of unmet clinical needs in IBDU24DK062429 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Ling-shiang Chuang, Ron Do · 2017 to 2026
$13.9M
Research Resources: Epigenomic and Transcriptomic Profiles of Human Immune CellsR24AI108564 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI MITCHELL KRONENBERG, Bjoern Peters · 2014 to 2026
$12.1M
Genomics of Chronic Renal Allograft RejectionU01AI070107 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MURPHY, BARBARA T. · 2006 to 2012
$9.4M
Genomic approach to identification of microglial networks involved in Alzheimer’s disease riskU01AG058635 · NIA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI GOATE, ALISON M · 2018 to 2022
$4.8M
Integrative Genomic Analyses of Macrophages in Crohns DiseaseR01DK106593 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CHO, JUDY H. · 2016 to 2020
$3.8M
Placental Functional Networks Linking Developmental Pesticide Exposure and Offspring NeurodevelopmentR01ES029212 · NIEHS · EMORY UNIVERSITY · PI CAUDLE, WILLIAM MICHAEL, CHEN, JIA · 2018 to 2022
$2.7M
Dichotomous roles of Shroom3 in Tubular cells and Podocytes in native and allograft kidneysR01DK122164 · NIDDK · YALE UNIVERSITY · PI Madhav C Menon · 2019 to 2026
$2.7M
NIAID NIH HHS R24 AI108564NIAID NIH HHS U01 AI063594NIAID NIH HHS U01 AI070107NIA NIH HHS U01 AG058635NIDDK NIH HHS R01 DK106593NIDDK NIH HHS R01 DK122164NIDDK NIH HHS U24 DK062429NIEHS NIH HHS R01 ES029212
6 · The paper itself

Abstract

Apolipoprotein L1 (APOL1) risk alleles in donor kidneys associate with graft loss, but whether recipient risk allele expression affects transplant outcomes is unclear. To test whether recipient APOL1 risk alleles independently correlate with transplant outcomes, we analyzed genome-wide SNP genotyping data on donors and recipients from 2 kidney transplant cohorts: Genomics of Chronic Allograft Rejection (GOCAR) and Clinical Trials in Organ Transplantation 01/17 (CTOT-01/17). We estimated genetic ancestry (quantified as the proportion of African ancestry, or pAFR) by ADMIXTURE and correlated APOL1 genotypes and pAFR with outcomes. In the GOCAR discovery set, we noted that the number of recipient APOL1 G1/G2 alleles (R-nAPOL1) associated with an increased risk of death-censored allograft loss (DCAL), independent of ancestry (HR = 2.14; P = 0.006), as well as within the subgroup of African American and Hispanic (AA/H) recipients (HR = 2.36; P = 0.003). R-nAPOL1 also associated with an increased risk of any T cell-mediated rejection (TCMR) event. These associations were validated in CTOT-01/17. Ex vivo studies of PMBCs revealed, unexpectedly, high expression levels of APOL1 in activated CD4+/CD8+ T cells and NK cells. We detected enriched immune response gene pathways in risk allele carriers compared with noncarriers on the kidney transplant waitlist and among healthy controls. Our findings demonstrate an immunomodulatory role for recipient APOL1 risk alleles associated with TCMR and DCAL. We believe this finding has broader implications for immune-mediated injury to native kidneys.

Indexed as

AdolescentAdultAgedAged, 80 and overAllelesApolipoprotein L1CreatinineFemaleGraft RejectionGraft SurvivalHumansKidney TransplantationMaleMiddle AgedPolymorphism, Single NucleotideRiskAPOL1 protein, humanApolipoprotein L1CreatinineGenetic variationNephrologyOrgan transplantationT cellsTransplantation

Identifiers

PMID34499625
PMCPMC8592534
OpenAlexW3196907073

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.