Evidence map›Paper›PMID 34496933›Full record

ArticleMolecular brain2021

Minhee Analysis Package: an integrated software package for detection and management of spontaneous synaptic events.

Yong Gyu Kim, Jae Jin Shin, Sang Jeong Kim

Abstract readComparative StudyValidation Study
In one paragraph

Article in Molecular brain, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
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  4. Activation of TRPA1 and TRPM3 triggers CaThe Journal of physiology · 2025
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  10. Detecting unitary synaptic events with machine learning.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yong Gyu KimDepartment of Physiology, Seoul National University College of Medicine, 103 Daehangno, Jongro-gu, Seoul, 03080, Republic of Korea.
Jae Jin ShinDepartment of Physiology, Seoul National University College of Medicine, 103 Daehangno, Jongro-gu, Seoul, 03080, Republic of Korea.
Sang Jeong KimDepartment of Physiology, Seoul National University College of Medicine, 103 Daehangno, Jongro-gu, Seoul, 03080, Republic of Korea. sangjkim@snu.ac.kr.ORCID 0000-0001-8931-3713

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To understand the information encoded in a connection between the neurons, postsynaptic current (PSC) has been widely measured as a primary index of synaptic strength in the field of neurophysiology. Although several automatic detection methods for PSCs have been proposed to simplify a workflow in the analysis, repetitive steps such as quantification and management of PSC data should be still performed with much effort. Here, we present Minhee Analysis Package, an integrated standalone software package that is capable of detecting, sorting, and quantifying PSC data. First, we developed a stepwise exploratory algorithm to detect PSC and validated our detection algorithm using the simulated and experimental data. We also described all the features and examples of the package so that users can use and follow them properly. In conclusion, our software package is expected to improve the convenience and efficiency of neurophysiologists to analyze PSC data by simplifying the workflow from detection to quantification. Minhee Analysis Package is freely available to download from http://www.github.com/parkgilbong/Minhee_Analysis_Pack .

Indexed as

SoftwareSynaptic PotentialsAlgorithmsAnalysis of VarianceAnimalsBrainComputer SimulationData DisplayMaleMiceMice, Inbred C57BLMiniature Postsynaptic PotentialsModels, NeurologicalNeuronsNeurophysiologyPyramidal CellsData analysis softwareData managementElectrophysiologyEvent detectionPostsynaptic current

Identifiers

PMID34496933
PMCPMC8425072

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.