Evidence map›Paper›PMID 34495700›Full record

ArticleJournal of virology2021

Cytoplasmic Tail Truncation of SARS-CoV-2 Spike Protein Enhances Titer of Pseudotyped Vectors but Masks the Effect of the D614G Mutation.

Hsu-Yu Chen, Chun Huang, Lu Tian, Xiaoli Huang, Chennan Zhang, George N Llewellyn, Geoffrey L Rogers, Kevin Andresen, Maurice R G O'Gorman, Ya-Wen Chen and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 25 citations in OpenAlex.

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  10. Virus-Induced Cell Fusion and Syncytia Formation.Results and problems in cell differentiation · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Hsu-Yu ChenDepartment of Molecular Microbiology and Immunology, Keck School of Medicine of the University of Southern Californiagrid.42505.36, Los Angeles, California, USA.
Chun HuangDepartment of Molecular Microbiology and Immunology, Keck School of Medicine of the University of Southern Californiagrid.42505.36, Los Angeles, California, USA.
Lu TianDepartment of Medicine, Keck School of Medicine of the University of Southern Californiagrid.42505.36, Los Angeles, California, USA.
Xiaoli HuangDepartment of Molecular Microbiology and Immunology, Keck School of Medicine of the University of Southern Californiagrid.42505.36, Los Angeles, California, USA.
Chennan ZhangDepartment of Medicine, Keck School of Medicine of the University of Southern Californiagrid.42505.36, Los Angeles, California, USA.
George N LlewellynDepartment of Molecular Microbiology and Immunology, Keck School of Medicine of the University of Southern Californiagrid.42505.36, Los Angeles, California, USA.
Geoffrey L RogersDepartment of Molecular Microbiology and Immunology, Keck School of Medicine of the University of Southern Californiagrid.42505.36, Los Angeles, California, USA.
Kevin AndresenDepartment of Pathology and Laboratory Medicine, Children's Hospital Los Angeles/Keck School of Medicine of USC, Los Angeles, California, USA.
Maurice R G O'GormanDepartment of Pathology and Laboratory Medicine, Children's Hospital Los Angeles/Keck School of Medicine of USC, Los Angeles, California, USA.
Ya-Wen ChenDepartment of Medicine, Keck School of Medicine of the University of Southern Californiagrid.42505.36, Los Angeles, California, USA.
Paula M CannonDepartment of Molecular Microbiology and Immunology, Keck School of Medicine of the University of Southern Californiagrid.42505.36, Los Angeles, California, USA.ORCID 0000-0003-0059-354X
University of Southern California · USChildren's Hospital of Los Angeles · US

Funding

W. M. Keck Foundation (Keck Foundation)
6 · The paper itself

Abstract

The high pathogenicity of SARS-CoV-2 requires it to be handled under biosafety level 3 conditions. Consequently, Spike protein-pseudotyped vectors are a useful tool to study viral entry and its inhibition, with retroviral, lentiviral (LV), and vesicular stomatitis virus (VSV) vectors the most commonly used systems. Methods to increase the titer of such vectors commonly include concentration by ultracentrifugation and truncation of the Spike protein cytoplasmic tail. However, limited studies have examined whether such a modification also impacts the protein's function. Here, we optimized concentration methods for SARS-CoV-2 Spike-pseudotyped VSV vectors, finding that tangential flow filtration produced vectors with more consistent titers than ultracentrifugation. We also examined the impact of Spike tail truncation on transduction of various cell types and sensitivity to convalescent serum neutralization. We found that tail truncation increased Spike incorporation into both LV and VSV vectors and resulted in enhanced titers but had no impact on sensitivity to convalescent serum. In addition, we analyzed the effect of the D614G mutation, which became a dominant SARS-CoV-2 variant early in the pandemic. Our studies revealed that, similar to the tail truncation, D614G independently increases Spike incorporation and vector titers, but this effect is masked by also including the cytoplasmic tail truncation. Therefore, the use of full-length Spike protein, combined with tangential flow filtration, is recommended as a method to generate high titer pseudotyped vectors that retain native Spike protein functions.

Indexed as

AnimalsAntibodies, NeutralizingCell LineGenetic VectorsHumansLentivirusMutationSARS-CoV-2Spike Glycoprotein, CoronavirusVesicular stomatitis Indiana virusViral LoadAntibodies, NeutralizingSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2cytoplasmic tail truncationD614G mutationpseudotyped vectorsSARS-CoV-2Spike protein

Identifiers

PMID34495700
PMCPMC8549521
OpenAlexW3197670117

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.