Evidence map›Paper›PMID 34494644›Full record

ArticleDisease models & mechanisms2021

Integrative transcriptomic profiling of a mouse model of hypertension-accelerated diabetic kidney disease.

Frederikke E Sembach, Helene M Ægidius, Lisbeth N Fink, Thomas Secher, Annemarie Aarup, Jacob Jelsing, Niels Vrang, Bo Feldt-Rasmussen, Kristoffer T G Rigbolt, Jens C Nielsen and 1 more

Open access · goldAbstract read
In one paragraph

Article in Disease models & mechanisms, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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  6. What lies beyond 100 years of insulin.Disease models & mechanisms · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Frederikke E SembachGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.
Helene M ÆgidiusGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.
Lisbeth N FinkGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.
Thomas SecherGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.
Annemarie AarupGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.ORCID 0000-0003-0829-2178
Jacob JelsingGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.
Niels VrangGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.
Bo Feldt-RasmussenDepartment of Clinical Medicine, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark.
Kristoffer T G RigboltGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.
Jens C NielsenGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.
Mette V ØstergaardGubra ApS, Hørsholm Kongevej 11B, 2970 Hørsholm, Denmark.ORCID 0000-0001-6075-2392
Gubra (Denmark) · DKUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The current understanding of molecular mechanisms driving diabetic kidney disease (DKD) is limited, partly due to the complex structure of the kidney. To identify genes and signalling pathways involved in the progression of DKD, we compared kidney cortical versus glomerular transcriptome profiles in uninephrectomized (UNx) db/db mouse models of early-stage (UNx only) and advanced [UNxplus adeno-associated virus-mediated renin-1 overexpression (UNx-Renin)] DKD using RNAseq. Compared to normoglycemic db/m mice, db/db UNx and db/db UNx-Renin mice showed marked changes in their kidney cortical and glomerular gene expression profiles. UNx-Renin mice displayed more marked perturbations in gene components associated with the activation of the immune system and enhanced extracellular matrix remodelling, supporting histological hallmarks of progressive DKD in this model. Single-nucleus RNAseq enabled the linking of transcriptome profiles to specific kidney cell types. In conclusion, integration of RNAseq at the cortical, glomerular and single-nucleus level provides an enhanced resolution of molecular signalling pathways associated with disease progression in preclinical models of DKD, and may thus be advantageous for identifying novel therapeutic targets in DKD.

Indexed as

Gene Expression ProfilingAnimalsDependovirusDiabetic NephropathiesDisease Models, AnimalFemaleGene Expression RegulationHypertensionKidney CortexKidney GlomerulusMiceMice, Inbred C57BLReninReninDiabetic kidney diseaseGlomerulusLaser-capture microdissectionMouse modelRNAseqSingle-nucleus

Identifiers

PMID34494644
PMCPMC8560499
OpenAlexW3197305786

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.