Evidence map›Paper›PMID 34492050›Full record

ArticlePloS one2021

Translation of human Δ133p53 mRNA and its targeting by antisense oligonucleotides complementary to the 5'-terminal region of this mRNA.

Paulina Żydowicz-Machtel, Mariola Dutkiewicz, Agata Swiatkowska, Dorota Gurda-Woźna, Jerzy Ciesiołka

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Paulina Żydowicz-MachtelInstitute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland.
Mariola DutkiewiczInstitute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland.ORCID 0000-0003-1098-0308
Agata SwiatkowskaInstitute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland.
Dorota Gurda-WoźnaInstitute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland.
Jerzy CiesiołkaInstitute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland.ORCID 0000-0001-7274-0751
Institute of Bioorganic Chemistry, Polish Academy of Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The p53 protein is expressed as at least twelve protein isoforms. Within intron 4 of the human TP53 gene, a P2 transcription initiation site is located and this transcript encodes two p53 isoforms: Δ133p53 and Δ160p53. Here, the secondary structure of the 5'-terminal region of P2-initiated mRNA was characterized by means of the SHAPE and Pb2+-induced cleavage methods and for the first time, a secondary structure model of this region was proposed. Surprisingly, only Δ133p53 isoform was synthetized in vitro from the P2-initiated p53 mRNA while translation from both initiation codons occurred after the transfection of vector-encoded model mRNA to HCT116 cells. Interestingly, translation performed in the presence of the cap analogue suggested that the cap-independent process contributes to the translation of P2-initiated p53 mRNA. Subsequently, several antisense oligonucleotides targeting the 5'-terminal region of P2-initiated p53 mRNA were designed. The selected oligomers were applied in in vitro translation assays as well as in cell lines and their impact on the Δ133p53 synthesis and on cell viability was investigated. The results show that these oligomers are attractive tools in the modulation of the translation of P2-initiated p53 mRNA through attacking the 5' terminus of the transcript. Since cell proliferation is also reduced by antisense oligomers that lower the level of Δ133p53, this demonstrates an involvement of this isoform in tumorigenesis.

Indexed as

Cell SurvivalCodon, InitiatorHCT116 CellsHumansIntronsOligonucleotides, AntisenseProtein BiosynthesisProtein IsoformsRNA, MessengerTranscription Initiation SiteTumor Suppressor Protein p53Codon, InitiatorOligonucleotides, AntisenseProtein IsoformsRNA, MessengerTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID34492050
PMCPMC8423303
OpenAlexW3198231697

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.