Evidence map›Paper›PMID 34491987›Full record

ArticlePLoS medicine2021

Derivation and external validation of a risk score for predicting HIV-associated tuberculosis to support case finding and preventive therapy scale-up: A cohort study.

Andrew F Auld, Andrew D Kerkhoff, Yasmeen Hanifa, Robin Wood, Salome Charalambous, Yuliang Liu, Tefera Agizew, Anikie Mathoma, Rosanna Boyd, Anand Date and 12 more

Open access · goldAbstract readValidation Study
In one paragraph

Article in PLoS medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 2 pooled it
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 2 syntheses or guidelines pooled it, 10 citations in OpenAlex.

  1. Subclinical tuberculosis: a meta-analysis of prevalence and scoping review of definitions, prevalence and clinical characteristics.European respiratory review : an official journal of the European Respiratory Society · 2024
    Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 8 institutions in 4 countries.

Andrew F AuldDivision of Global HIV & TB, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.ORCID 0000-0001-5089-9163
Andrew D KerkhoffDivision of HIV, Infectious Diseases and Global Medicine at Zuckerberg San Francisco General Hospital and Trauma Center, Department of Medicine, University of California San Francisco, San Francisco, California, United States of America.ORCID 0000-0002-5023-6658
Yasmeen HanifaTB Centre, London School of Hygiene & Tropical Medicine, London, United Kingdom.ORCID 0000-0002-1677-0697
Robin WoodThe Desmond Tutu HIV Centre, Institute of Infectious Disease and Molecular Medicine, Cape Town, South Africa.ORCID 0000-0002-4276-7117
Salome CharalambousAurum Institute, Johannesburg, South Africa.ORCID 0000-0001-7143-1009
Yuliang LiuDivision of Global HIV & TB, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Tefera AgizewDivision of TB Elimination, Centers for Disease Control and Prevention, Gaborone, Botswana.ORCID 0000-0003-1848-7307
Anikie MathomaDivision of TB Elimination, Centers for Disease Control and Prevention, Gaborone, Botswana.ORCID 0000-0002-2464-843X
Rosanna BoydDivision of TB Elimination, Centers for Disease Control and Prevention, Gaborone, Botswana.
Anand DateDivision of Global HIV & TB, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Ray W ShiraishiDivision of Global HIV & TB, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
George BicegoDivision of Global HIV & TB, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Unami Mathebula-ModongoDivision of TB Elimination, Centers for Disease Control and Prevention, Gaborone, Botswana.ORCID 0000-0001-8514-1133
Heather AlexanderDivision of Global HIV & TB, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Christopher SerumolaDivision of TB Elimination, Centers for Disease Control and Prevention, Gaborone, Botswana.
Goabaone Rankgoane-PonoMinistry of Health and Wellness, Gaborone, Botswana.
Pontsho PonoMinistry of Health and Wellness, Gaborone, Botswana.ORCID 0000-0001-6912-8086
Alyssa FinlayDivision of TB Elimination, Centers for Disease Control and Prevention, Gaborone, Botswana.ORCID 0000-0002-7597-2395
James C ShepherdDivision of TB Elimination, Centers for Disease Control and Prevention, Gaborone, Botswana.
Tedd V EllerbrockDivision of Global HIV & TB, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.ORCID 0000-0003-3985-8330
Alison D GrantTB Centre, London School of Hygiene & Tropical Medicine, London, United Kingdom.ORCID 0000-0002-2437-5195
Katherine FieldingTB Centre, London School of Hygiene & Tropical Medicine, London, United Kingdom.ORCID 0000-0002-6524-3754
Centers for Disease Control and Prevention · USLondon School of Hygiene & Tropical Medicine · GBMinistry of Health · BWAurum Institute · ZADesmond Tutu HIV Foundation · ZASan Francisco General Hospital · USUniversity of Botswana · BWYale University · US

Funding

Training in HIV Translational ResearchT32AI060530 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Diane V Havlir · 2005 to 2026
$6.4M
Medical Research Council G1100689Medical Research Council MR/R010161/1NIAID NIH HHS T32 AI060530
6 · The paper itself

Abstract

backgroundAmong people living with HIV (PLHIV), more flexible and sensitive tuberculosis (TB) screening tools capable of detecting both symptomatic and subclinical active TB are needed to (1) reduce morbidity and mortality from undiagnosed TB; (2) facilitate scale-up of tuberculosis preventive therapy (TPT) while reducing inappropriate prescription of TPT to PLHIV with subclinical active TB; and (3) allow for differentiated HIV-TB care. METHODS AND

findingsWe used Botswana XPRES trial data for adult HIV clinic enrollees collected during 2012 to 2015 to develop a parsimonious multivariable prognostic model for active prevalent TB using both logistic regression and random forest machine learning approaches. A clinical score was derived by rescaling final model coefficients. The clinical score was developed using southern Botswana XPRES data and its accuracy validated internally, using northern Botswana data, and externally using 3 diverse cohorts of antiretroviral therapy (ART)-naive and ART-experienced PLHIV enrolled in XPHACTOR, TB Fast Track (TBFT), and Gugulethu studies from South Africa (SA). Predictive accuracy of the clinical score was compared with the World Health Organization (WHO) 4-symptom TB screen. Among 5,418 XPRES enrollees, 2,771 were included in the derivation dataset; 67% were female, median age was 34 years, median CD4 was 240 cells/μL, 189 (7%) had undiagnosed prevalent TB, and characteristics were similar between internal derivation and validation datasets. Among XPHACTOR, TBFT, and Gugulethu cohorts, median CD4 was 400, 73, and 167 cells/μL, and prevalence of TB was 5%, 10%, and 18%, respectively. Factors predictive of TB in the derivation dataset and selected for the clinical score included male sex (1 point), ≥1 WHO TB symptom (7 points), smoking history (1 point), temperature >37.5°C (6 points), body mass index (BMI) <18.5kg/m2 (2 points), and severe anemia (hemoglobin <8g/dL) (3 points). Sensitivity using WHO 4-symptom TB screen was 73%, 80%, 94%, and 94% in XPRES, XPHACTOR, TBFT, and Gugulethu cohorts, respectively, but increased to 88%, 87%, 97%, and 97%, when a clinical score of ≥2 was used. Negative predictive value (NPV) also increased 1%, 0.3%, 1.6%, and 1.7% in XPRES, XPHACTOR, TBFT, and Gugulethu cohorts, respectively, when the clinical score of ≥2 replaced WHO 4-symptom TB screen. Categorizing risk scores into low (<2), moderate (2 to 10), and high-risk categories (>10) yielded TB prevalence of 1%, 1%, 2%, and 6% in the lowest risk group and 33%, 22%, 26%, and 32% in the highest risk group for XPRES, XPHACTOR, TBFT, and Gugulethu cohorts, respectively. At clinical score ≥2, the number needed to screen (NNS) ranged from 5.0 in Gugulethu to 11.0 in XPHACTOR. Limitations include that the risk score has not been validated in resource-rich settings and needs further evaluation and validation in contemporary cohorts in Africa and other resource-constrained settings.

conclusionsThe simple and feasible clinical score allowed for prioritization of sensitivity and NPV, which could facilitate reductions in mortality from undiagnosed TB and safer administration of TPT during proposed global scale-up efforts. Differentiation of risk by clinical score cutoff allows flexibility in designing differentiated HIV-TB care to maximize impact of available resources.

Indexed as

CoinfectionHIV Long-Term SurvivorsMass ScreeningPreventive Health ServicesAdultAnti-Retroviral AgentsAntitubercular AgentsBotswanaClinical Trials as TopicEarly DiagnosisFemaleHIV InfectionsHumansMaleMiddle AgedPredictive Value of TestsAnti-Retroviral AgentsAntitubercular Agents

Identifiers

PMID34491987
PMCPMC8454974
OpenAlexW3198094430

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.