Evidence map›Paper›PMID 34491346›Full record

ArticleMolecular biology and evolution2021

Two Functional Epithelial Sodium Channel Isoforms Are Present in Rodents despite Pronounced Evolutionary Pseudogenization and Exon Fusion.

Sean M Gettings, Stephan Maxeiner, Maria Tzika, Matthew R D Cobain, Irina Ruf, Fritz Benseler, Nils Brose, Gabriela Krasteva-Christ, Greetje Vande Velde, Matthias Schönberger and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Molecular biology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  6. The Epithelial Sodium Channel-An Underestimated Drug Target.International journal of molecular sciences · 2023
    Review
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  8. Review
  9. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Sean M GettingsSchool of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.ORCID 0000-0002-2424-2261
Stephan MaxeinerInstitute for Anatomy and Cell Biology, Saarland University School of Medicine, Homburg, Germany.ORCID 0000-0002-4472-695X
Maria TzikaSchool of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
Matthew R D CobainSchool of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.ORCID 0000-0003-1701-3986
Irina RufDivision of Messel Research and Mammalogy, Senckenberg Research Institute and Natural History Museum Frankfurt, Frankfurt am Main, Germany.
Fritz BenselerDepartment of Molecular Neurobiology, Max Planck Institute of Experimental Medicine, Göttingen, Germany.
Nils BroseDepartment of Molecular Neurobiology, Max Planck Institute of Experimental Medicine, Göttingen, Germany.
Gabriela Krasteva-ChristInstitute for Anatomy and Cell Biology, Saarland University School of Medicine, Homburg, Germany.
Greetje Vande VeldeBiomedical Imaging, Department of Imaging and Pathology, Faculty of Medicine, KU Leuven, Leuven, Belgium.
Matthias SchönbergerBiomedical Imaging, Department of Imaging and Pathology, Faculty of Medicine, KU Leuven, Leuven, Belgium.
Mike AlthausInstitute for Functional Gene Analytics, Department of Natural Sciences, Bonn-Rhein-Sieg University of Applied Sciences, Rheinbach, Germany.ORCID 0000-0002-3554-7538
Newcastle University · GBKU Leuven · BEMax Planck Institute of Experimental Medicine · DESaarland University · DEHochschule Bonn-Rhein-Sieg · DESenckenberg Research Institute and Natural History Museum Frankfurt/M · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The epithelial sodium channel (ENaC) plays a key role in salt and water homeostasis in tetrapod vertebrates. There are four ENaC subunits (α, β, γ, δ), forming heterotrimeric αβγ- or δβγ-ENaCs. Although the physiology of αβγ-ENaC is well understood, for decades the field has stalled with respect to δβγ-ENaC due to the lack of mammalian model organisms. The SCNN1D gene coding for δ-ENaC was previously believed to be absent in rodents, hindering studies using standard laboratory animals. We analyzed all currently available rodent genomes and discovered that SCNN1D is present in rodents but was independently lost in five rodent lineages, including the Muridae (mice and rats). The independent loss of SCNN1D in rodent lineages may be constrained by phylogeny and taxon-specific adaptation to dry habitats, however habitat aridity does not provide a selection pressure for maintenance of SCNN1D across Rodentia. A fusion of two exons coding for a structurally flexible region in the extracellular domain of δ-ENaC appeared in the Hystricognathi (a group that includes guinea pigs). This conserved pattern evolved at least 41 Ma and represents a new autapomorphic feature for this clade. Exon fusion does not impair functionality of guinea pig (Cavia porcellus) δβγ-ENaC expressed in Xenopus oocytes. Electrophysiological characterization at the whole-cell and single-channel level revealed conserved biophysical features and mechanisms controlling guinea pig αβγ- and δβγ-ENaC function as compared with human orthologs. Guinea pigs therefore represent commercially available mammalian model animals that will help shed light on the physiological function of δ-ENaC.

Indexed as

Epithelial Sodium ChannelsRodentiaAnimalsExonsGuinea PigsMiceOocytesProtein IsoformsRatsXenopus laevisEpithelial Sodium ChannelsProtein Isoformsdelta-subunitENaCepithelial sodium channelevolutionexon fusionpseudogenerodentSCNN1D

Identifiers

PMID34491346
PMCPMC8662647
OpenAlexW3196511335

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.