Evidence map›Paper›PMID 34491056›Full record

ArticleJournal of chemical theory and computation2021

A Martini Coarse Grained Model of Citrate-Capped Gold Nanoparticles Interacting with Lipid Bilayers.

Sebastian Salassi, Lucrezia Caselli, Jacopo Cardellini, Enrico Lavagna, Costanza Montis, Debora Berti, Giulia Rossi

Abstract read
In one paragraph

Article in Journal of chemical theory and computation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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  11. Membrane Phase Drives the Assembly of Gold Nanoparticles on Biomimetic Lipid Bilayers.The journal of physical chemistry. C, Nanomaterials and interfaces · 2022
    Article
  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sebastian SalassiDepartment of Physics, University of Genoa, Via Dodecaneso 33, Genoa 16146, Italy.ORCID https://orcid.org/0000-0002-2590-7763
Lucrezia CaselliDepartment of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, Sesto Fiorentino, Florence 50019, Italy.
Jacopo CardelliniDepartment of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, Sesto Fiorentino, Florence 50019, Italy.
Enrico LavagnaDepartment of Physics, University of Genoa, Via Dodecaneso 33, Genoa 16146, Italy.ORCID https://orcid.org/0000-0002-7399-5569
Costanza MontisDepartment of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, Sesto Fiorentino, Florence 50019, Italy.
Debora BertiDepartment of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, Sesto Fiorentino, Florence 50019, Italy.ORCID https://orcid.org/0000-0001-8967-560X
Giulia RossiDepartment of Physics, University of Genoa, Via Dodecaneso 33, Genoa 16146, Italy.ORCID https://orcid.org/0000-0001-6916-2049

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Citrate capping is one of the most common strategies to achieve the colloidal stability of Au nanoparticles (NPs) with diameters ranging from a few to hundreds of nanometers. Citrate-capped Au nanoparticles (CNPs) represent a step of the synthesis of Au NPs with specific functionalities, as CNPs can be further functionalized via ligand-exchange reactions, leading to the replacement of citrate with other organic ligands. In vitro, CNPs are also used to address the fundamental aspects of NP-membrane interactions, as they can directly interact with cells or model cell membranes. Their affinity for the bilayer is again mediated by the exchange of citrate with lipid molecules. Here, we propose a new computational model of CNPs compatible with the coarse grained Martini force field. The model, which we develop and validate through an extensive comparison with new all-atom molecular dynamics (MD) simulations and UV-vis and Fourier transform infrared spectroscopy data, is aimed at the MD simulation of the interaction between citrate-capped NPs and model phosphatidylcholine lipid membranes. As a test application we show that, during the interaction between a single CNP and a flat planar 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine bilayer, the citrate coating is spontaneously replaced by lipids on the surface of Au NPs, while the NP size and shape determine the final structural configuration of the NP-bilayer complex.

Identifiers

PMID34491056
PMCPMC8515808

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.