Evidence map›Paper›PMID 34491039›Full record

ArticleJournal of the American Chemical Society2021

HygY Is a Twitch Radical SAM Epimerase with Latent Dehydrogenase Activity Revealed upon Mutation of a Single Cysteine Residue.

Ronald A Besandre, Zhang Chen, Ian Davis, Jiawei Zhang, Mark Walter Ruszczycky, Aimin Liu, Hung-Wen Liu

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ronald A BesandreDepartment of Chemistry, University of Texas at Austin, Austin, TX 78712, United States.
Zhang ChenDepartment of Chemistry, University of Texas at Austin, Austin, TX 78712, United States.
Ian DavisDepartment of Chemistry, University of Texas at San Antonio, San Antonio, TX 78249, United States.
Jiawei ZhangDepartment of Chemistry, University of Texas at Austin, Austin, TX 78712, United States.
Mark Walter RuszczyckyDivision of Chemical Biology and Medicinal Chemistry, College of Pharmacy, University of Texas at Austin, Austin, TX 78712, United States.
Aimin LiuDepartment of Chemistry, University of Texas at San Antonio, San Antonio, TX 78249, United States.
Hung-Wen LiuDepartment of Chemistry, University of Texas at Austin, Austin, TX 78712, United States.ORCID 0000-0001-8953-4794
The University of Texas at Austin · USThe University of Texas at San Antonio · US

Funding

Mechanistic Studies of Deoxy Sugar BiosynthesisR01GM035906 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI LIU, HUNG-WEN · 1986 to 2023
$6.1M
Heme-dependent chemistry in tyrosine oxidation: Diversity Supplement on 5R01GM108988-08 for supporting Samuel MontoyaR01GM108988 · NIGMS · UNIVERSITY OF TEXAS SAN ANTONIO · PI LIU, AIMIN · 2014 to 2025
$4.2M
MECHANISMS OF BIOSYNTHETIC FORMATION OF DEOXY SUGARSR37GM035906 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI LIU, HUNG-WEN · 1999 to 2008
$3.4M
NIGMS NIH HHS R01 GM035906NIGMS NIH HHS R01 GM108988NIGMS NIH HHS R37 GM035906
6 · The paper itself

Abstract

HygY is a SPASM/twitch radical SAM enzyme hypothesized to catalyze the C2'-epimerization of galacamine during the biosynthesis of hygromycin B. This activity is confirmed via biochemical and structural analysis of the derivatized reaction products using chemically synthesized deuterated substrate, high-resolution mass spectrometry and

Indexed as

Amino Acid SubstitutionBacterial ProteinsElectron Spin Resonance SpectroscopyGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicHygromycin BMutationOxidation-ReductionOxidoreductasesRacemases and EpimerasesStreptomycesBacterial ProteinsHygromycin BOxidoreductasesRacemases and Epimerases

Identifiers

PMID34491039
PMCPMC8611816
OpenAlexW3198580027

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.